Literature DB >> 18041003

Detection of unusual rotavirus genotypes G8P[8] and G12P[6] in South Korea.

Van Phan Le1, Ji-Yeon Kim, Sung-Lim Cho, Sun-Woo Nam, Inseok Lim, Hee-Joong Lee, Kijeong Kim, Sang-In Chung, Wonkeun Song, Kyu Man Lee, Moon-Soo Rhee, Jung-Sook Lee, Wonyong Kim.   

Abstract

Five hundred four fecal specimens, collected between 2004 and 2006 from young children with acute diarrhea, were screened for rotavirus by ELISA with VP6-specific antibody. Of these samples, 394 (78.2%) were confirmed as group A rotavirus and they underwent G- and P typing using a combination of ELISA, RT-PCR, and sequence analysis methods. The dominant circulating G serotype was G1 (35.6%) followed by G3 (26.4%), G4 (14.7%), and G2 (11.9%). There was a low prevalence of G9 (1.0%) and of unusual G type rotavirus, in particular, G12 (0.5%) and G8 (0.3%). Of the P genotype rotavirus in circulation, P[8] (53.0%) was most common followed by P[6] (15.5%), P[4] (15.2%), and P[9] (2.3%). Determination of G- and P type combinations revealed that G1P[8] strains were most prevalent (25.4%), amid G3P[8] (16.8%), G2P[4] (6.3%), and G4P[6] (6.1%) strains. Unusual or rare combinations such as G2P[6], G2P[8], G3P[4], G2P[9], G1P[9], G3P[9], G12P[6], G1P[4], G3P[6], and G8P[8] were also found. Owing to the recent emergence of G8 and G12 rotavirus, the findings from this study are important since they provide new information concerning the local and global spread of rotavirus genotypes. (c) 2007 Wiley-Liss, Inc.

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Year:  2008        PMID: 18041003     DOI: 10.1002/jmv.21044

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   2.327


  12 in total

1.  Complete genomic characterization of cell culture adapted human G12P[6] rotaviruses isolated from South Korea.

Authors:  Van Thai Than; Van Phan Le; Inseok Lim; Wonyong Kim
Journal:  Virus Genes       Date:  2011-01-30       Impact factor: 2.332

2.  Molecular epidemic features and variation of rotavirus among children with diarrhea in Lanzhou, China, 2001-2006.

Authors:  Yu Jin; Xin-Hua Ye; Zhao-Yin Fang; Yu-Ning Li; Xue-Mei Yang; Qiao-Li Dong; Xiang Huang
Journal:  World J Pediatr       Date:  2008-08       Impact factor: 2.764

3.  Whole Genomic Analysis of Human G12P[6] and G12P[8] Rotavirus Strains that Have Emerged in Myanmar.

Authors:  Tomihiko Ide; Satoshi Komoto; Kyoko Higo-Moriguchi; Khaing Win Htun; Yi Yi Myint; Theingi Win Myat; Kyaw Zin Thant; Hlaing Myat Thu; Mo Mo Win; Htun Naing Oo; Than Htut; Mitsutaka Wakuda; Francis Ekow Dennis; Kei Haga; Yoshiki Fujii; Kazuhiko Katayama; Shofiqur Rahman; Sa Van Nguyen; Kouji Umeda; Keiji Oguma; Takao Tsuji; Koki Taniguchi
Journal:  PLoS One       Date:  2015-05-04       Impact factor: 3.240

Review 4.  Prevalence of rotavirus genotypes in South Korea in 1989-2009: implications for a nationwide rotavirus vaccine program.

Authors:  Van Thai Than; Wonyong Kim
Journal:  Korean J Pediatr       Date:  2013-11-27

Review 5.  Diversity of rotavirus strains causing diarrhea in <5 years old Chinese children: a systematic review.

Authors:  Yue Li; Song-Mei Wang; Shan-Shan Zhen; Ying Chen; Wei Deng; Paul E Kilgore; Xuan-Yi Wang
Journal:  PLoS One       Date:  2014-01-08       Impact factor: 3.240

6.  Diversity of rotavirus strain circulated in gwangju, republic of Korea.

Authors:  Min Ji Kim; Hye Sook Jeong; Seon Gyeong Kim; Se Mi Lee; Sun Hee Kim; Hye-Young Kee; Eun-Hye Jo; Hye-Jung Park; Dong-Ryong Ha; Eun Sun Kim; Kye-Won Seo; Jae Keun Chung
Journal:  Osong Public Health Res Perspect       Date:  2014-11-01

7.  Prevalence and genetic diversity of rotavirus infection in children with acute gastroenteritis in a hospital setting, Nairobi Kenya in post vaccination era: a cross-sectional study.

Authors:  Mary-Theresa Agutu; Julliette Ongus; Janeth Kombich; Rose Kamenwa; James Nyangao; John Kagira; Adelaide Ayoyi Ogutu; Austine Bitek
Journal:  Pan Afr Med J       Date:  2017-01-24

8.  Burden and typing of rotavirus group a in children with acute gastroenteritis in shiraz, southern iran.

Authors:  Akram Najafi; M Kargar; Mohammad Kargar; T Jafarpour; Tarlan Jafarpour; A Najafi
Journal:  Iran Red Crescent Med J       Date:  2012-09-30       Impact factor: 0.611

9.  Epidemiology and clinical features of rotavirus and norovirus infection among children in Ji'nan, China.

Authors:  Lintao Sai; Jintang Sun; Lihua Shao; Shuai Chen; Haihong Liu; Lixian Ma
Journal:  Virol J       Date:  2013-10-08       Impact factor: 4.099

10.  Changing distribution of age, clinical severity, and genotypes of rotavirus gastroenteritis in hospitalized children after the introduction of vaccination: a single center study in Seoul between 2011 and 2014.

Authors:  Jung Ok Shim; Ju Young Chang; Sue Shin; Jin Soo Moon; Jae Sung Ko
Journal:  BMC Infect Dis       Date:  2016-06-14       Impact factor: 3.090

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