Literature DB >> 18039863

Drosophila UTX is a histone H3 Lys27 demethylase that colocalizes with the elongating form of RNA polymerase II.

Edwin R Smith1, Min Gyu Lee, Benjamin Winter, Nathan M Droz, Joel C Eissenberg, Ramin Shiekhattar, Ali Shilatifard.   

Abstract

Histone H3 methylation at Lys27 (H3K27 methylation) is a hallmark of silent chromatin, while H3K4 methylation is associated with active chromatin regions. Here we report that a Drosophila JmjC family member, dUTX, specifically demethylates di- and trimethylated but not monomethylated H3K27. dUTX localization on chromatin correlates with the elongating form of RNA polymerase II (Pol II), and dUTX can associate with Pol II. Furthermore, heat shock induction results in the recruitment of dUTX to the hsp70 gene, like that of several other Pol II elongation factors. Our data indicate that dUTX is intimately associated with actively transcribed genes and may provide a paradigm for how H3K27 demethylation is required for the activation of preinitiated Pol II on transcriptionally poised genes.

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Year:  2007        PMID: 18039863      PMCID: PMC2223382          DOI: 10.1128/MCB.01504-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  32 in total

1.  Linking global histone acetylation to the transcription enhancement of X-chromosomal genes in Drosophila males.

Authors:  E R Smith; C D Allis; J C Lucchesi
Journal:  J Biol Chem       Date:  2001-07-09       Impact factor: 5.157

Review 2.  TPR proteins: the versatile helix.

Authors:  Luca D D'Andrea; Lynne Regan
Journal:  Trends Biochem Sci       Date:  2003-12       Impact factor: 13.807

Review 3.  Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins.

Authors:  Leonie Ringrose; Renato Paro
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

4.  Drosophila Paf1 modulates chromatin structure at actively transcribed genes.

Authors:  Karen Adelman; Wenxiang Wei; M Behfar Ardehali; Janis Werner; Bing Zhu; Danny Reinberg; John T Lis
Journal:  Mol Cell Biol       Date:  2006-01       Impact factor: 4.272

5.  Regulation of heat shock gene expression by RNA polymerase II elongation factor, Elongin A.

Authors:  Mark Gerber; Kristen Tenney; Joan W Conaway; Ronald C Conaway; Joel C Eissenberg; Ali Shilatifard
Journal:  J Biol Chem       Date:  2004-12-16       Impact factor: 5.157

6.  SMRT-mediated repression of an H3K27 demethylase in progression from neural stem cell to neuron.

Authors:  Kristen Jepsen; Derek Solum; Tianyuan Zhou; Robert J McEvilly; Hyun-Jung Kim; Christopher K Glass; Ola Hermanson; Michael G Rosenfeld
Journal:  Nature       Date:  2007-10-10       Impact factor: 49.962

7.  Drosophila ELL is associated with actively elongating RNA polymerase II on transcriptionally active sites in vivo.

Authors:  M Gerber; J Ma; K Dean; J C Eissenberg; A Shilatifard
Journal:  EMBO J       Date:  2001-11-01       Impact factor: 11.598

8.  The UTX gene escapes X inactivation in mice and humans.

Authors:  A Greenfield; L Carrel; D Pennisi; C Philippe; N Quaderi; P Siggers; K Steiner; P P Tam; A P Monaco; H F Willard; P Koopman
Journal:  Hum Mol Genet       Date:  1998-04       Impact factor: 6.150

9.  Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock.

Authors:  Amber K Boehm; Abbie Saunders; Janis Werner; John T Lis
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

10.  Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains.

Authors:  Wolfgang Fischle; Yanming Wang; Steven A Jacobs; Youngchang Kim; C David Allis; Sepideh Khorasanizadeh
Journal:  Genes Dev       Date:  2003-08-01       Impact factor: 11.361

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  76 in total

Review 1.  The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

Review 2.  Histone methylation in myelodysplastic syndromes.

Authors:  Yue Wei; Irene Gañán-Gómez; Sophie Salazar-Dimicoli; Sara L McCay; Guillermo Garcia-Manero
Journal:  Epigenomics       Date:  2011-04       Impact factor: 4.778

3.  The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation.

Authors:  Shuzhen Chen; Jian Ma; Feizhen Wu; Li-Jun Xiong; Honghui Ma; Wenqi Xu; Ruitu Lv; Xiaodong Li; Judit Villen; Steven P Gygi; Xiaole Shirley Liu; Yang Shi
Journal:  Genes Dev       Date:  2012-06-15       Impact factor: 11.361

Review 4.  Regulating a master regulator: establishing tissue-specific gene expression in skeletal muscle.

Authors:  Arif Aziz; Qi-Cai Liu; F Jeffrey Dilworth
Journal:  Epigenetics       Date:  2010-11-01       Impact factor: 4.528

5.  Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A.

Authors:  Toru Sengoku; Shigeyuki Yokoyama
Journal:  Genes Dev       Date:  2011-10-14       Impact factor: 11.361

6.  Jmjd3 and UTX play a demethylase-independent role in chromatin remodeling to regulate T-box family member-dependent gene expression.

Authors:  Sara A Miller; Sarah E Mohn; Amy S Weinmann
Journal:  Mol Cell       Date:  2010-11-24       Impact factor: 17.970

7.  H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome.

Authors:  Florian M Pauler; Mathew A Sloane; Ru Huang; Kakkad Regha; Martha V Koerner; Ido Tamir; Andreas Sommer; Andras Aszodi; Thomas Jenuwein; Denise P Barlow
Journal:  Genome Res       Date:  2008-12-01       Impact factor: 9.043

Review 8.  MLL3/MLL4/COMPASS Family on Epigenetic Regulation of Enhancer Function and Cancer.

Authors:  Christie C Sze; Ali Shilatifard
Journal:  Cold Spring Harb Perspect Med       Date:  2016-11-01       Impact factor: 6.915

9.  Inferring causal relationships among different histone modifications and gene expression.

Authors:  Hong Yu; Shanshan Zhu; Bing Zhou; Huiling Xue; Jing-Dong J Han
Journal:  Genome Res       Date:  2008-06-18       Impact factor: 9.043

10.  The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.

Authors:  Sunnie M Yoh; Joseph S Lucas; Katherine A Jones
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

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