Literature DB >> 18037437

Actin hydrophobic loop 262-274 and filament nucleation and elongation.

Alexander Shvetsov1, Vitold E Galkin, Albina Orlova, Martin Phillips, Sarah E Bergeron, Peter A Rubenstein, Edward H Egelman, Emil Reisler.   

Abstract

The importance of actin hydrophobic loop 262-274 dynamics to actin polymerization and filament stability has been shown recently with the use of the yeast mutant actin L180C/L269C/C374A, in which the hydrophobic loop could be locked in a "parked" conformation by a disulfide bond between C180 and C269. Such a cross-linked globular actin monomer does not form filaments, suggesting nucleation and/or elongation inhibition. To determine the role of loop dynamics in filament nucleation and/or elongation, we studied the polymerization of the cross-linked actin in the presence of cofilin, to assist with actin nucleation, and with phalloidin, to stabilize the elongating filament segments. We demonstrate here that together, but not individually, phalloidin and cofilin co-rescue the polymerization of cross-linked actin. The polymerization was also rescued by filament seeds added together with phalloidin but not with cofilin. Thus, loop immobilization via cross-linking inhibits both filament nucleation and elongation. Nevertheless, the conformational changes needed to catalyze ATP hydrolysis by actin occur in the cross-linked actin. When actin filaments are fully decorated by cofilin, the helical twist of filamentous actin (F-actin) changes by approximately 5 degrees per subunit. Electron microscopic analysis of filaments rescued by cofilin and phalloidin revealed a dense contact between opposite strands in F-actin and a change of twist by approximately 1 degrees per subunit, indicating either partial or disordered attachment of cofilin to F-actin and/or competition between cofilin and phalloidin to alter F-actin symmetry. Our findings show an importance of the hydrophobic loop conformational dynamics in both actin nucleation and elongation and reveal that the inhibition of these two steps in the cross-linked actin can be relieved by appropriate factors.

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Year:  2007        PMID: 18037437      PMCID: PMC4022318          DOI: 10.1016/j.jmb.2007.10.076

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  31 in total

1.  A robust algorithm for the reconstruction of helical filaments using single-particle methods.

Authors:  E H Egelman
Journal:  Ultramicroscopy       Date:  2000-12       Impact factor: 2.689

2.  F-actin-like ATPase activity in a polymerization-defective mutant yeast actin (V266G/L267G).

Authors:  X Yao; P A Rubenstein
Journal:  J Biol Chem       Date:  2001-04-27       Impact factor: 5.157

3.  Cross-linking constraints on F-actin structure.

Authors:  E Kim; W Wriggers; M Phillips; K Kokabi; P A Rubenstein; E Reisler
Journal:  J Mol Biol       Date:  2000-06-02       Impact factor: 5.469

4.  Prokaryotic origin of the actin cytoskeleton.

Authors:  F van den Ent; L A Amos; J Löwe
Journal:  Nature       Date:  2001-09-06       Impact factor: 49.962

5.  Identification of yeast cofilin residues specific for actin monomer and PIP2 binding.

Authors:  P J Ojala; V Paavilainen; P Lappalainen
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

6.  Determining the differences in actin binding by human ADF and cofilin.

Authors:  Sharon Yeoh; Brian Pope; Hans G Mannherz; Alan Weeds
Journal:  J Mol Biol       Date:  2002-01-25       Impact factor: 5.469

7.  Actin filament severing by cofilin.

Authors:  Dmitry Pavlov; Andras Muhlrad; John Cooper; Martin Wear; Emil Reisler
Journal:  J Mol Biol       Date:  2006-11-03       Impact factor: 5.469

8.  A new internal mode in F-actin helps explain the remarkable evolutionary conservation of actin's sequence and structure.

Authors:  Vitold E Galkin; Margaret S VanLoock; Albina Orlova; Edward H Egelman
Journal:  Curr Biol       Date:  2002-04-02       Impact factor: 10.834

9.  Locking the hydrophobic loop 262-274 to G-actin surface by a disulfide bridge prevents filament formation.

Authors:  Alexander Shvetsov; Runa Musib; Martin Phillips; Peter A Rubenstein; Emil Reisler
Journal:  Biochemistry       Date:  2002-09-03       Impact factor: 3.162

10.  Actin depolymerizing factor stabilizes an existing state of F-actin and can change the tilt of F-actin subunits.

Authors:  V E Galkin; A Orlova; N Lukoyanova; W Wriggers; E H Egelman
Journal:  J Cell Biol       Date:  2001-04-02       Impact factor: 10.539

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  9 in total

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Authors:  Taro Q P Noguchi; Yuki Gomibuchi; Kenji Murakami; Hironori Ueno; Keiko Hirose; Takeyuki Wakabayashi; Taro Q P Uyeda
Journal:  J Biol Chem       Date:  2009-11-21       Impact factor: 5.157

2.  Insertions within the actin core of actin-related protein 3 (Arp3) modulate branching nucleation by Arp2/3 complex.

Authors:  Su-Ling Liu; Jordan R May; Luke A Helgeson; Brad J Nolen
Journal:  J Biol Chem       Date:  2012-11-12       Impact factor: 5.157

3.  Near-atomic resolution for one state of F-actin.

Authors:  Vitold E Galkin; Albina Orlova; Matthijn R Vos; Gunnar F Schröder; Edward H Egelman
Journal:  Structure       Date:  2014-12-18       Impact factor: 5.006

4.  Actin isoform-specific conformational differences observed with hydrogen/deuterium exchange and mass spectrometry.

Authors:  Ema Stokasimov; Peter A Rubenstein
Journal:  J Biol Chem       Date:  2009-07-15       Impact factor: 5.157

5.  Molecular origins of cofilin-linked changes in actin filament mechanics.

Authors:  Jun Fan; Marissa G Saunders; Esmael J Haddadian; Karl F Freed; Enrique M De La Cruz; Gregory A Voth
Journal:  J Mol Biol       Date:  2013-01-24       Impact factor: 5.469

6.  ATP and ADP actin states.

Authors:  Dmitri S Kudryashov; Emil Reisler
Journal:  Biopolymers       Date:  2013-04       Impact factor: 2.505

7.  Rounding Out the Understanding of ACD Toxicity with the Discovery of Cyclic Forms of Actin Oligomers.

Authors:  Harper Smith; Nick Pinkerton; David B Heisler; Elena Kudryashova; Aaron R Hall; Kelly R Karch; Andrew Norris; Vicki Wysocki; Marcos Sotomayor; Emil Reisler; Dimitrios Vavylonis; Dmitri S Kudryashov
Journal:  Int J Mol Sci       Date:  2021-01-13       Impact factor: 5.923

8.  Structure of the actin-depolymerizing factor homology domain in complex with actin.

Authors:  Ville O Paavilainen; Esko Oksanen; Adrian Goldman; Pekka Lappalainen
Journal:  J Cell Biol       Date:  2008-07-14       Impact factor: 10.539

9.  Inter-subunit interactions drive divergent dynamics in mammalian and Plasmodium actin filaments.

Authors:  Ross G Douglas; Prajwal Nandekar; Julia-Elisabeth Aktories; Hirdesh Kumar; Rebekka Weber; Julia M Sattler; Mirko Singer; Simone Lepper; S Kashif Sadiq; Rebecca C Wade; Friedrich Frischknecht
Journal:  PLoS Biol       Date:  2018-07-16       Impact factor: 8.029

  9 in total

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