Literature DB >> 11937026

A new internal mode in F-actin helps explain the remarkable evolutionary conservation of actin's sequence and structure.

Vitold E Galkin1, Margaret S VanLoock, Albina Orlova, Edward H Egelman.   

Abstract

Actin is one of the most highly conserved eukaryotic proteins. There are no amino acid changes between the chicken and human skeletal muscle isoforms, and the most dissimilar actins still share more than 85% sequence identity [1]. We suggest that large discrete internal modes of freedom within the actin filament may account for a significant component of this conservation, since each subunit must make multiple specific interactions with neighboring subunits. In support of this, we find that the same state of tilt of the actin subunit exists in both yeast and vertebrate striated muscle actin, and that in both the two domains undergo a "propeller rotation." A similar movement of domains has also been seen in hexokinase, Hsc70, and Arp2/3, all structural homologs of actin, suggesting that such an interdomain hinge motion is common to proteins in this superfamily. Subunit-subunit interactions within the actin filament involve sequence insertions that are not present in MreB, a bacterial homolog of actin. Remarkably, we find that in the tilted state actin subunits make new contacts with neighboring subunits that also involve these inserts, suggesting a key role for these elements in F-actin polymorphism.

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Year:  2002        PMID: 11937026     DOI: 10.1016/s0960-9822(02)00742-x

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  51 in total

1.  Refinement of F-actin model against fiber diffraction data by long-range normal modes.

Authors:  Yinghao Wu; Jianpeng Ma
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

2.  How does ATP hydrolysis control actin's associations?

Authors:  Elena P Sablin; John F Dawson; Margaret S VanLoock; James A Spudich; Edward H Egelman; Robert J Fletterick
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-07       Impact factor: 11.205

3.  Simulation of F-actin filaments of several microns.

Authors:  Dengming Ming; Yifei Kong; Yinghao Wu; Jianpeng Ma
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

4.  G146V mutation at the hinge region of actin reveals a myosin class-specific requirement of actin conformations for motility.

Authors:  Taro Q P Noguchi; Tomotaka Komori; Nobuhisa Umeki; Noriyuki Demizu; Kohji Ito; Atsuko Hikikoshi Iwane; Kiyotaka Tokuraku; Toshio Yanagida; Taro Q P Uyeda
Journal:  J Biol Chem       Date:  2012-05-27       Impact factor: 5.157

Review 5.  The ParMRC system: molecular mechanisms of plasmid segregation by actin-like filaments.

Authors:  Jeanne Salje; Pananghat Gayathri; Jan Löwe
Journal:  Nat Rev Microbiol       Date:  2010-10       Impact factor: 60.633

Review 6.  The Cytoskeleton and Its Regulation by Calcium and Protons.

Authors:  Peter K Hepler
Journal:  Plant Physiol       Date:  2016-01       Impact factor: 8.340

Review 7.  Lever arms and necks: a common mechanistic theme across the myosin superfamily.

Authors:  David M Warshaw
Journal:  J Muscle Res Cell Motil       Date:  2004       Impact factor: 2.698

8.  Actin-destabilizing factors disrupt filaments by means of a time reversal of polymerization.

Authors:  Albina Orlova; Alexander Shvetsov; Vitold E Galkin; Dmitry S Kudryashov; Peter A Rubenstein; Edward H Egelman; Emil Reisler
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-10       Impact factor: 11.205

9.  The structure of nonvertebrate actin: implications for the ATP hydrolytic mechanism.

Authors:  S Vorobiev; B Strokopytov; D G Drubin; C Frieden; S Ono; J Condeelis; P A Rubenstein; S C Almo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-05       Impact factor: 11.205

10.  F-actin structure destabilization and DNase I binding loop: fluctuations mutational cross-linking and electron microscopy analysis of loop states and effects on F-actin.

Authors:  Zeynep A Oztug Durer; Karthikeyan Diraviyam; David Sept; Dmitri S Kudryashov; Emil Reisler
Journal:  J Mol Biol       Date:  2009-11-06       Impact factor: 5.469

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