Literature DB >> 18034374

Functional protein expression from a DNA based wheat germ cell-free system.

Kate Qin Zhao1, Robin Hurst, Michael R Slater, Robert F Bulleit.   

Abstract

Wheat germ based eukaryotic cell-free systems have been shown to be applicable for both functional and structural analyses of proteins. However, the existing methods might require specialized instrumentation and/or a separate mRNA synthesis step. We have developed a DNA based, highly productive, coupled transcription/translation wheat germ cell-free system that incorporates the normally separate mRNA synthesis step and does not require specialized instrumentation. Using a small-volume batch reaction with fluorescence labeling, DNA templates predicted to encode proteins could be quickly screened for their ability to direct the expression of proteins of the appropriate size. Protein yield can be increased as much as 2 to 4-fold in this system using a dialysis reaction, reaching approximately 200-440 microg/ml in 10-20 h. Furthermore, enzyme activities can be assayed directly in the extract without further purification. Simple purification with affinity tags can be achieved in one-step and with minor modifications, efficient SeMet and [U-15N] labeling of >95% can be accomplished in this system. Thus, this efficient cell-free expression system can facilitate both functional and structural proteomics.

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Year:  2007        PMID: 18034374     DOI: 10.1007/s10969-007-9035-2

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  29 in total

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Authors:  M Kozak
Journal:  Gene       Date:  1999-07-08       Impact factor: 3.688

Review 2.  High-throughput, genome-scale protein production method based on the wheat germ cell-free expression system.

Authors:  Yaeta Endo; Tatsuya Sawasaki
Journal:  Biotechnol Adv       Date:  2003-11       Impact factor: 14.227

3.  How incorrect annotations evolve--the case of short ORFs.

Authors:  Michal Linial
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4.  Cell-free protein production and labeling protocol for NMR-based structural proteomics.

Authors:  Dmitriy A Vinarov; Betsy L Lytle; Francis C Peterson; Ejan M Tyler; Brian F Volkman; John L Markley
Journal:  Nat Methods       Date:  2004-10-21       Impact factor: 28.547

5.  Microgram-scale protein structure determination by NMR.

Authors:  James M Aramini; Paolo Rossi; Clemens Anklin; Rong Xiao; Gaetano T Montelione
Journal:  Nat Methods       Date:  2007-05-13       Impact factor: 28.547

Review 6.  High throughput protein production for functional proteomics.

Authors:  Pascal Braun; Josh LaBaer
Journal:  Trends Biotechnol       Date:  2003-09       Impact factor: 19.536

Review 7.  Wheat germ cell-free platform for eukaryotic protein production.

Authors:  Dmitriy A Vinarov; Carrie L Loushin Newman; John L Markley
Journal:  FEBS J       Date:  2006-08-23       Impact factor: 5.542

8.  Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes.

Authors:  M Kozak
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

9.  Comparison of cell-based and cell-free protocols for producing target proteins from the Arabidopsis thaliana genome for structural studies.

Authors:  Robert C Tyler; David J Aceti; Craig A Bingman; Claudia C Cornilescu; Brian G Fox; Ronnie O Frederick; Won Bae Jeon; Min S Lee; Craig S Newman; Francis C Peterson; George N Phillips; Mark N Shahan; Shanteri Singh; Jikui Song; Hassan K Sreenath; Ejan M Tyler; Eldon L Ulrich; Dmitriy A Vinarov; Frank C Vojtik; Brian F Volkman; Russell L Wrobel; Qin Zhao; John L Markley
Journal:  Proteins       Date:  2005-05-15

10.  Production in two-liter beverage bottles of proteins for NMR structure determination labeled with either 15N- or 13C-15N.

Authors:  Qin Zhao; Ronnie Frederick; Kory Seder; Sandy Thao; Hassan Sreenath; Francis Peterson; Brian F Volkman; John L Markley; Brian G Fox
Journal:  J Struct Funct Genomics       Date:  2004
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Journal:  J Biol Chem       Date:  2012-07-16       Impact factor: 5.157

2.  Cell-free expression of protein kinase a for rapid activity assays.

Authors:  Donna M Leippe; Kate Qin Zhao; Kevin Hsiao; Michael R Slater
Journal:  Anal Chem Insights       Date:  2010-05-19

3.  Engineering of a wheat germ expression system to provide compatibility with a high throughput pET-based cloning platform.

Authors:  Li Zhao; Kate Q Zhao; Robin Hurst; Michael R Slater; Thomas B Acton; G V T Swapna; Ritu Shastry; Gregory J Kornhaber; Gaetano T Montelione
Journal:  J Struct Funct Genomics       Date:  2010-06-24

Review 4.  Efflux-mediated antifungal drug resistance.

Authors:  Richard D Cannon; Erwin Lamping; Ann R Holmes; Kyoko Niimi; Philippe V Baret; Mikhail V Keniya; Koichi Tanabe; Masakazu Niimi; Andre Goffeau; Brian C Monk
Journal:  Clin Microbiol Rev       Date:  2009-04       Impact factor: 26.132

5.  Tobacco BY-2 cell-free lysate: an alternative and highly-productive plant-based in vitro translation system.

Authors:  Matthias Buntru; Simon Vogel; Holger Spiegel; Stefan Schillberg
Journal:  BMC Biotechnol       Date:  2014-05-03       Impact factor: 2.563

  5 in total

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