Literature DB >> 18031926

Dynamics of HIV infection studied with cellular automata and conformon-P systems.

David W Corne1, Pierluigi Frisco.   

Abstract

Recently a cellular automaton (CA) has been used to model the dynamics of HIV infection, with interesting results. We replicate and further test this model, and we introduce an alternative model based on conformon-P (cP) systems. We find (in common with other recently published comments) that the CA model is very sensitive to initial conditions and produces appropriate qualitative dynamics only for a narrow range of rule probabilities. In contrast, the cP system model is robust to a wide range of conditions and parameters, with more reproducible qualitative agreement to the overall dynamics and to the densities of healthy and infected cells observed in vivo.

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Year:  2007        PMID: 18031926     DOI: 10.1016/j.biosystems.2007.01.007

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  3 in total

Review 1.  Systems immunology: a survey of modeling formalisms, applications and simulation tools.

Authors:  Vipin Narang; James Decraene; Shek-Yoon Wong; Bindu S Aiswarya; Andrew R Wasem; Shiang Rong Leong; Alexandre Gouaillard
Journal:  Immunol Res       Date:  2012-09       Impact factor: 2.829

2.  A cellular automata model of bone formation.

Authors:  Gabrielle K Van Scoy; Estee L George; Flora Opoku Asantewaa; Lucy Kerns; Marnie M Saunders; Alicia Prieto-Langarica
Journal:  Math Biosci       Date:  2017-02-09       Impact factor: 2.144

3.  Modeling formalisms in Systems Biology.

Authors:  Daniel Machado; Rafael S Costa; Miguel Rocha; Eugénio C Ferreira; Bruce Tidor; Isabel Rocha
Journal:  AMB Express       Date:  2011-12-05       Impact factor: 3.298

  3 in total

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