Literature DB >> 18031219

Extending X-ray crystallography to allow the imaging of noncrystalline materials, cells, and single protein complexes.

Jianwei Miao1, Tetsuya Ishikawa, Qun Shen, Thomas Earnest.   

Abstract

In 1999, researchers extended X-ray crystallography to allow the imaging of noncrystalline specimens by measuring the X-ray diffraction pattern of a noncrystalline specimen and then directly phasing it using the oversampling method with iterative algorithms. Since then, the field has evolved moving in three important directions. The first is the 3D structural determination of noncrystalline materials, which includes the localization of the defects and strain field inside nanocrystals, and quantitative 3D imaging of disordered materials such as nanoparticles and biomaterials. The second is the 3D imaging of frozen-hydrated whole cells at a resolution of 10 nm or better. A main thrust is to localize specific multiprotein complexes inside cells. The third is the potential of imaging single large protein complexes using extremely intense and ultrashort X-ray pulses. In this article, we review the principles of this methodology, summarize recent developments in each of the three directions, and illustrate a few examples.

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Year:  2008        PMID: 18031219     DOI: 10.1146/annurev.physchem.59.032607.093642

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  9 in total

1.  Imaging electronic quantum motion with light.

Authors:  Gopal Dixit; Oriol Vendrell; Robin Santra
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

2.  Radiation dose reduction in medical x-ray CT via Fourier-based iterative reconstruction.

Authors:  Benjamin P Fahimian; Yunzhe Zhao; Zhifeng Huang; Russell Fung; Yu Mao; Chun Zhu; Maryam Khatonabadi; John J DeMarco; Stanley J Osher; Michael F McNitt-Gray; Jianwei Miao
Journal:  Med Phys       Date:  2013-03       Impact factor: 4.071

3.  Phase retrieval for superposed signals from multiple binary objects.

Authors:  Andreas Alpers; Gabor T Herman; Henning Friis Poulsen; Søren Schmidt
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2010-09-01       Impact factor: 2.129

4.  Radiation dose reduction and image enhancement in biological imaging through equally-sloped tomography.

Authors:  Edwin Lee; Benjamin P Fahimian; Cristina V Iancu; Christian Suloway; Gavin E Murphy; Elizabeth R Wright; Daniel Castaño-Díez; Grant J Jensen; Jianwei Miao
Journal:  J Struct Biol       Date:  2008-08-15       Impact factor: 2.867

5.  Data processing software suite SITENNO for coherent X-ray diffraction imaging using the X-ray free-electron laser SACLA.

Authors:  Yuki Sekiguchi; Tomotaka Oroguchi; Yuki Takayama; Masayoshi Nakasako
Journal:  J Synchrotron Radiat       Date:  2014-03-15       Impact factor: 2.616

6.  X-ray imaging of chemically active valence electrons during a pericyclic reaction.

Authors:  Timm Bredtmann; Misha Ivanov; Gopal Dixit
Journal:  Nat Commun       Date:  2014-11-26       Impact factor: 14.919

7.  Single-pulse enhanced coherent diffraction imaging of bacteria with an X-ray free-electron laser.

Authors:  Jiadong Fan; Zhibin Sun; Yaling Wang; Jaehyun Park; Sunam Kim; Marcus Gallagher-Jones; Yoonhee Kim; Changyong Song; Shengkun Yao; Jian Zhang; Jianhua Zhang; Xiulan Duan; Kensuke Tono; Makina Yabashi; Tetsuya Ishikawa; Chunhai Fan; Yuliang Zhao; Zhifang Chai; Xueyun Gao; Thomas Earnest; Huaidong Jiang
Journal:  Sci Rep       Date:  2016-09-23       Impact factor: 4.379

8.  Phase recovery and holographic image reconstruction using deep learning in neural networks.

Authors:  Yair Rivenson; Yibo Zhang; Harun Günaydın; Da Teng; Aydogan Ozcan
Journal:  Light Sci Appl       Date:  2018-02-23       Impact factor: 17.782

9.  Dictionary Learning Phase Retrieval from Noisy Diffraction Patterns.

Authors:  Joshin P Krishnan; José M Bioucas-Dias; Vladimir Katkovnik
Journal:  Sensors (Basel)       Date:  2018-11-16       Impact factor: 3.576

  9 in total

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