Literature DB >> 18023736

Cellular automata as microscopic models of cell migration in heterogeneous environments.

Haralambos Hatzikirou1, Andreas Deutsch.   

Abstract

Understanding the precise interplay of moving cells with their typically heterogeneous environment is crucial for central biological processes as embryonic morphogenesis, wound healing, immune reactions or tumor growth. Mathematical models allow for the analysis of cell migration strategies involving complex feedback mechanisms between the cells and their microenvironment. Here, we introduce a cellular automaton (especially lattice-gas cellular automaton-LGCA) as a microscopic model of cell migration together with a (mathematical) tensor characterization of different biological environments. Furthermore, we show how mathematical analysis of the LGCA model can yield an estimate for the cell dispersion speed within a given environment. Novel imaging techniques like diffusion tensor imaging (DTI) may provide tensor data of biological microenvironments. As an application, we present LGCA simulations of a proliferating cell population moving in an external field defined by clinical DTI data. This system can serve as a model of in vivo glioma cell invasion.

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Year:  2008        PMID: 18023736     DOI: 10.1016/S0070-2153(07)81014-3

Source DB:  PubMed          Journal:  Curr Top Dev Biol        ISSN: 0070-2153            Impact factor:   4.897


  21 in total

1.  Parameter estimation with a novel gradient-based optimization method for biological lattice-gas cellular automaton models.

Authors:  Carsten Mente; Ina Prade; Lutz Brusch; Georg Breier; Andreas Deutsch
Journal:  J Math Biol       Date:  2010-10-01       Impact factor: 2.259

2.  Quantifying trophoblast migration: In vitro approaches to address in vivo situations.

Authors:  Joanna James; Win Tun; Alys Clark
Journal:  Cell Adh Migr       Date:  2015-10-19       Impact factor: 3.405

Review 3.  At the biological modeling and simulation frontier.

Authors:  C Anthony Hunt; Glen E P Ropella; Tai Ning Lam; Jonathan Tang; Sean H J Kim; Jesse A Engelberg; Shahab Sheikh-Bahaei
Journal:  Pharm Res       Date:  2009-09-09       Impact factor: 4.200

4.  Multi-scale analysis and modelling of collective migration in biological systems.

Authors:  Andreas Deutsch; Peter Friedl; Luigi Preziosi; Guy Theraulaz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-27       Impact factor: 6.237

Review 5.  Modelling collective cell motion: are on- and off-lattice models equivalent?

Authors:  Josué Manik Nava-Sedeño; Anja Voß-Böhme; Haralampos Hatzikirou; Andreas Deutsch; Fernando Peruani
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-27       Impact factor: 6.237

Review 6.  Multiscale modeling for biologists.

Authors:  Martin Meier-Schellersheim; Iain D C Fraser; Frederick Klauschen
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2009 Jul-Aug

7.  Generation and dynamics of an endogenous, self-generated signaling gradient across a migrating tissue.

Authors:  Gayatri Venkiteswaran; Stephen W Lewellis; John Wang; Eric Reynolds; Charles Nicholson; Holger Knaut
Journal:  Cell       Date:  2013-10-10       Impact factor: 41.582

8.  Glioma growth modeling based on the effect of vital nutrients and metabolic products.

Authors:  Maria Papadogiorgaki; Panagiotis Koliou; Michalis E Zervakis
Journal:  Med Biol Eng Comput       Date:  2018-03-08       Impact factor: 2.602

Review 9.  Review on experiment-based two- and three-dimensional models for wound healing.

Authors:  Daphne Weihs; Amit Gefen; Fred J Vermolen
Journal:  Interface Focus       Date:  2016-10-06       Impact factor: 3.906

10.  Evolutionary game theory elucidates the role of glycolysis in glioma progression and invasion.

Authors:  D Basanta; M Simon; H Hatzikirou; A Deutsch
Journal:  Cell Prolif       Date:  2008-12       Impact factor: 6.831

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