Literature DB >> 18018690

Beyond parameter estimation: extending biomechanical modeling by the explicit exploration of model topology.

Francisco J Valero-Cuevas1, Vikrant V Anand, Anupam Saxena, Hod Lipson.   

Abstract

Selecting a model topology that realistically predicts biomechanical function remains an unsolved problem. Today's dominant modeling approach is to replicate experimental input/output data by performing parameter estimation on an assumed topology. In contrast, we propose that modeling some complex biomechanical systems requires the explicit and simultaneous exploration of model topology (i.e., the type, number, and organization of physics-based functional building blocks) and parameter values. In this paper, we use the example of modeling the notoriously complex tendon networks of the fingers to present three critical advances towards the goal of implementing this extended modeling paradigm. First, we describe a novel computational environment to perform quasi-static simulations of arbitrary topologies of elastic structures undergoing large deformations. Second, we use this form of simulation to show that the assumed topology for the tendon network of a finger plays an important role in the propagation of tension to the finger joints. Third, we demonstrate the use of a novel inference algorithm that simultaneously explores the topology and parameter values for hidden synthetic tendon networks. We conclude by discussing critical issues of observability, separability, and uniqueness of topological features inferred from input/output data, and outline the challenges that need to be overcome to apply this novel modeling paradigm to extract causal models in real anatomical systems.

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Year:  2007        PMID: 18018690     DOI: 10.1109/TBME.2007.906494

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  11 in total

1.  Estimation of musculoskeletal models from in situ measurements of muscle action in the rat hindlimb.

Authors:  Sang Hoon Yeo; Christopher H Mullens; Thomas G Sandercock; Dinesh K Pai; Matthew C Tresch
Journal:  J Exp Biol       Date:  2011-03-01       Impact factor: 3.312

2.  A method to determine whether a musculoskeletal model can resist arbitrary external loadings within a prescribed range.

Authors:  Alan Chu; Richard E Hughes
Journal:  Comput Methods Biomech Biomed Engin       Date:  2010-12       Impact factor: 1.763

3.  Simultaneous Kinematic and Contact Force Modeling of a Human Finger Tendon System Using Bond Graphs and Robotic Validation.

Authors:  James A Tigue; Raymond J King; Stephen A Mascaro
Journal:  J Dyn Syst Meas Control       Date:  2019-12-23       Impact factor: 1.372

4.  Computational Models for Neuromuscular Function.

Authors:  Francisco J Valero-Cuevas; Heiko Hoffmann; Manish U Kurse; Jason J Kutch; Evangelos A Theodorou
Journal:  IEEE Rev Biomed Eng       Date:  2009

5.  Extrapolatable analytical functions for tendon excursions and moment arms from sparse datasets.

Authors:  Manish U Kurse; Hod Lipson; Francisco J Valero-Cuevas
Journal:  IEEE Trans Biomed Eng       Date:  2012-03-05       Impact factor: 4.538

6.  Exploring the high-dimensional structure of muscle redundancy via subject-specific and generic musculoskeletal models.

Authors:  F J Valero-Cuevas; B A Cohn; H F Yngvason; E L Lawrence
Journal:  J Biomech       Date:  2015-04-22       Impact factor: 2.712

7.  Improving the fitness of high-dimensional biomechanical models via data-driven stochastic exploration.

Authors:  Veronica J Santos; Carlos D Bustamante; Francisco J Valero-Cuevas
Journal:  IEEE Trans Biomed Eng       Date:  2008-10-07       Impact factor: 4.538

8.  Functional inference of complex anatomical tendinous networks at a macroscopic scale via sparse experimentation.

Authors:  Anupam Saxena; Hod Lipson; Francisco J Valero-Cuevas
Journal:  PLoS Comput Biol       Date:  2012-11-08       Impact factor: 4.475

9.  Biomechanical analysis of force distribution in human finger extensor mechanisms.

Authors:  Dan Hu; Lei Ren; David Howard; Changfu Zong
Journal:  Biomed Res Int       Date:  2014-07-09       Impact factor: 3.411

Review 10.  On neuromechanical approaches for the study of biological and robotic grasp and manipulation.

Authors:  Francisco J Valero-Cuevas; Marco Santello
Journal:  J Neuroeng Rehabil       Date:  2017-10-09       Impact factor: 4.262

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