Literature DB >> 17999063

High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3.

John Vogel1, Theresa Hill.   

Abstract

Brachypodium distachyon (Brachypodium) is a small grass with biological attributes (rapid generation time, small genome, diploid accessions, small stature and simple growth requirements) that make it suitable for use as a model system. In addition, a growing list of genomic resources have been developed or are currently under development including: cDNA libraries, BAC libraries, EST sequences, BAC end sequences, a physical map, genetic markers, a linkage map and, most importantly, the complete genome sequence. To maximize the utility of Brachypodium as a model grass it is necessary to develop an efficient Agrobacterium-mediated transformation system. In this report we describe the identification of a transformable inbred diploid line, Bd21-3, and the development of a transformation method with transformation efficiencies as high as 41% of co-cultivated calluses producing transgenic plants. Conducting the co-cultivation step under desiccating conditions produced the greatest improvement in transformation efficiency.

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Year:  2007        PMID: 17999063     DOI: 10.1007/s00299-007-0472-y

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  11 in total

1.  T-DNA insertional mutagenesis for functional genomics in rice.

Authors:  J S Jeon; S Lee; K H Jung; S H Jun; D H Jeong; J Lee; C Kim; S Jang; K Yang; J Nam; K An; M J Han; R J Sung; H S Choi; J H Yu; J H Choi; S Y Cho; S S Cha; S I Kim; G An
Journal:  Plant J       Date:  2000-06       Impact factor: 6.417

Review 2.  Transgene integration, organization and interaction in plants.

Authors:  Ajay Kohli; Richard M Twyman; Rita Abranches; Eva Wegel; Eva Stoger; Paul Christou
Journal:  Plant Mol Biol       Date:  2003-05       Impact factor: 4.076

3.  Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics.

Authors:  Naxin Huo; Yong Q Gu; Gerard R Lazo; John P Vogel; Devin Coleman-Derr; Ming-Cheng Luo; Roger Thilmony; David F Garvin; Olin D Anderson
Journal:  Genome       Date:  2006-09       Impact factor: 2.166

4.  Rice transformation for crop improvement and functional genomics.

Authors: 
Journal:  Plant Sci       Date:  2000-09-08       Impact factor: 4.729

Review 5.  Nuclear DNA amounts in angiosperms: progress, problems and prospects.

Authors:  M D Bennett; I J Leitch
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

6.  Brachypodium distachyon. A new model system for functional genomics in grasses.

Authors:  J Draper; L A Mur; G Jenkins; G C Ghosh-Biswas; P Bablak; R Hasterok; A P Routledge
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

7.  A rapid and efficient transformation protocol for the grass Brachypodium distachyon.

Authors:  Pernille Christiansen; Claus Henrik Andersen; Thomas Didion; Marianne Folling; Klaus Kristian Nielsen
Journal:  Plant Cell Rep       Date:  2004-10-19       Impact factor: 4.570

8.  The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences.

Authors:  Naxin Huo; Gerard R Lazo; John P Vogel; Frank M You; Yaqin Ma; Daniel M Hayden; Devin Coleman-Derr; Theresa A Hill; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo; Yong Q Gu
Journal:  Funct Integr Genomics       Date:  2007-11-06       Impact factor: 3.410

9.  A DNA transformation-competent Arabidopsis genomic library in Agrobacterium.

Authors:  G R Lazo; P A Stein; R A Ludwig
Journal:  Biotechnology (N Y)       Date:  1991-10

10.  Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization.

Authors:  Robert Hasterok; Agnieszka Marasek; Iain S Donnison; Ian Armstead; Ann Thomas; Ian P King; Elzbieta Wolny; Dominika Idziak; John Draper; Glyn Jenkins
Journal:  Genetics       Date:  2006-02-19       Impact factor: 4.562

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  123 in total

1.  Brachypodium distachyon as a new model system for understanding iron homeostasis in grasses: phylogenetic and expression analysis of Yellow Stripe-Like (YSL) transporters.

Authors:  Burcu K Yordem; Sarah S Conte; Jian Feng Ma; Kengo Yokosho; Kenneth A Vasques; Srinivasa N Gopalsamy; Elsbeth L Walker
Journal:  Ann Bot       Date:  2011-08-10       Impact factor: 4.357

2.  PHYTOCHROME C is an essential light receptor for photoperiodic flowering in the temperate grass, Brachypodium distachyon.

Authors:  Daniel P Woods; Thomas S Ream; Gregory Minevich; Oliver Hobert; Richard M Amasino
Journal:  Genetics       Date:  2014-07-14       Impact factor: 4.562

3.  Brachypodium as a model for the grasses: today and the future.

Authors:  Jelena Brkljacic; Erich Grotewold; Randy Scholl; Todd Mockler; David F Garvin; Philippe Vain; Thomas Brutnell; Richard Sibout; Michael Bevan; Hikmet Budak; Ana L Caicedo; Caixia Gao; Yong Gu; Samuel P Hazen; Ben F Holt; Shin-Young Hong; Mark Jordan; Antonio J Manzaneda; Thomas Mitchell-Olds; Keiichi Mochida; Luis A J Mur; Chung-Mo Park; John Sedbrook; Michelle Watt; Shao Jian Zheng; John P Vogel
Journal:  Plant Physiol       Date:  2011-07-19       Impact factor: 8.340

4.  Conservation and divergence of YODA MAPKKK function in regulation of grass epidermal patterning.

Authors:  Emily Abrash; M Ximena Anleu Gil; Juliana L Matos; Dominique C Bergmann
Journal:  Development       Date:  2018-07-17       Impact factor: 6.868

5.  Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments.

Authors:  Vincent Chochois; John P Vogel; Gregory J Rebetzke; Michelle Watt
Journal:  Plant Physiol       Date:  2015-05-14       Impact factor: 8.340

6.  Identification and molecular characterization of a Brachypodium distachyon GIGANTEA gene: functional conservation in monocot and dicot plants.

Authors:  Shin-Young Hong; Sangmin Lee; Pil Joon Seo; Moon-Sik Yang; Chung-Mo Park
Journal:  Plant Mol Biol       Date:  2009-12-10       Impact factor: 4.076

7.  Brachypodium distachyon grain: identification and subcellular localization of storage proteins.

Authors:  C Larré; S Penninck; B Bouchet; V Lollier; O Tranquet; S Denery-Papini; F Guillon; H Rogniaux
Journal:  J Exp Bot       Date:  2010-06       Impact factor: 6.992

8.  Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon.

Authors:  John P Vogel; Metin Tuna; Hikmet Budak; Naxin Huo; Yong Q Gu; Michael A Steinwand
Journal:  BMC Plant Biol       Date:  2009-07-13       Impact factor: 4.215

9.  An integrated physical, genetic and cytogenetic map of Brachypodium distachyon, a model system for grass research.

Authors:  Melanie Febrer; Jose Luis Goicoechea; Jonathan Wright; Neil McKenzie; Xiang Song; Jinke Lin; Kristi Collura; Marina Wissotski; Yeisoo Yu; Jetty S S Ammiraju; Elzbieta Wolny; Dominika Idziak; Alexander Betekhtin; Dave Kudrna; Robert Hasterok; Rod A Wing; Michael W Bevan
Journal:  PLoS One       Date:  2010-10-18       Impact factor: 3.240

10.  A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Authors:  Yong Q Gu; Yaqin Ma; Naxin Huo; John P Vogel; Frank M You; Gerard R Lazo; William M Nelson; Carol Soderlund; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo
Journal:  BMC Genomics       Date:  2009-10-27       Impact factor: 3.969

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