Literature DB >> 17995299

Continuous macroscopic limit of a discrete stochastic model for interaction of living cells.

Mark Alber1, Nan Chen, Pavel M Lushnikov, Stuart A Newman.   

Abstract

We derive a continuous limit of a two-dimensional stochastic cellular Potts model (CPM) describing cells moving in a medium and reacting to each other through direct contact, cell-cell adhesion, and long-range chemotaxis. All coefficients of the general macroscopic model in the form of a Fokker-Planck equation describing evolution of the cell probability density function are derived from parameters of the CPM. A very good agreement is demonstrated between CPM Monte Carlo simulations and a numerical solution of the macroscopic model. It is also shown that, in the absence of contact cell-cell interactions, the obtained model reduces to the classical macroscopic Keller-Segel model. A general multiscale approach is demonstrated by simulating spongy bone formation, suggesting that self-organizing physical mechanisms can account for this developmental process.

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Year:  2007        PMID: 17995299     DOI: 10.1103/PhysRevLett.99.168102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

1.  Stochastic collective movement of cells and fingering morphology: no maverick cells.

Authors:  Gaddiel Yonathan Ouaknin; Pinhas Zvi Bar-Yoseph
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

2.  A multiscale model of thrombus development.

Authors:  Zhiliang Xu; Nan Chen; Malgorzata M Kamocka; Elliot D Rosen; Mark Alber
Journal:  J R Soc Interface       Date:  2008-07-06       Impact factor: 4.118

3.  The effects of cell compressibility, motility and contact inhibition on the growth of tumor cell clusters using the Cellular Potts Model.

Authors:  Jonathan F Li; John Lowengrub
Journal:  J Theor Biol       Date:  2013-11-06       Impact factor: 2.691

4.  Physical models of collective cell motility: from cell to tissue.

Authors:  Brian A Camley; Wouter-Jan Rappel
Journal:  J Phys D Appl Phys       Date:  2017-02-14       Impact factor: 3.207

5.  Detection and characterization of chemotaxis without cell tracking.

Authors:  Jack D Hywood; Gregory Rice; Sophie V Pageon; Mark N Read; Maté Biro
Journal:  J R Soc Interface       Date:  2021-03-10       Impact factor: 4.118

6.  Multiscale Model of Colorectal Cancer Using the Cellular Potts Framework.

Authors:  James M Osborne
Journal:  Cancer Inform       Date:  2015-10-04

7.  The complex ecosystem in non small cell lung cancer invasion.

Authors:  Seth Haney; Jessica Konen; Adam I Marcus; Maxim Bazhenov
Journal:  PLoS Comput Biol       Date:  2018-05-24       Impact factor: 4.475

8.  Multi-scale modeling in morphogenesis: a critical analysis of the cellular Potts model.

Authors:  Anja Voss-Böhme
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

9.  Scalable population-level modelling of biological cells incorporating mechanics and kinetics in continuous time.

Authors:  Stefan Engblom; Daniel B Wilson; Ruth E Baker
Journal:  R Soc Open Sci       Date:  2018-08-01       Impact factor: 2.963

10.  Integration of in vitro and in silico Models Using Bayesian Optimization With an Application to Stochastic Modeling of Mesenchymal 3D Cell Migration.

Authors:  Francisco Merino-Casallo; Maria J Gomez-Benito; Yago Juste-Lanas; Ruben Martinez-Cantin; Jose M Garcia-Aznar
Journal:  Front Physiol       Date:  2018-09-11       Impact factor: 4.566

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