Literature DB >> 17986619

Synergic mechanism and fabrication target for bipedal nanomotors.

Zhisong Wang1.   

Abstract

Inspired by the discovery of dimeric motor proteins capable of undergoing transportation in living cells, significant efforts have been expended recently to the fabrication of track-walking nanomotors possessing two foot-like components that each can bind or detach from an array of anchorage groups on the track in response to local events of reagent consumption. The central problem in fabricating bipedal nanomotors is how the motor as a whole can gain the synergic capacity of directional track-walking, given the fact that each pedal component alone often is incapable of any directional drift. Implemented bipedal motors to date solve this thermodynamically intricate problem by an intuitive strategy that requires a hetero-pedal motor, multiple anchorage species for the track, and multiple reagent species for motor operation. Here we performed realistic molecular mechanics calculations on molecule-scale models to identify a detailed molecular mechanism by which motor-level directionality arises from a homo-pedal motor along a minimally heterogeneous track. Optimally, the operation may be reduced to a random supply of a single species of reagents to allow the motor's autonomous functioning. The mechanism suggests a distinct class of fabrication targets of drastically reduced system requirements. Intriguingly, a defective form of the mechanism falls into the realm of the well known Brownian motor mechanism, yet distinct features emerge from the normal working of the mechanism.

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Year:  2007        PMID: 17986619      PMCID: PMC2084272          DOI: 10.1073/pnas.0703639104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

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Authors:  K Visscher; M J Schnitzer; S M Block
Journal:  Nature       Date:  1999-07-08       Impact factor: 49.962

2.  A structural change in the kinesin motor protein that drives motility.

Authors:  S Rice; A W Lin; D Safer; C L Hart; N Naber; B O Carragher; S M Cain; E Pechatnikova; E M Wilson-Kubalek; M Whittaker; E Pate; R Cooke; E W Taylor; R A Milligan; R D Vale
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

3.  Atomic scale engines: cars and wheels.

Authors:  M Porto; M Urbakh; J Klafter
Journal:  Phys Rev Lett       Date:  2000-06-26       Impact factor: 9.161

4.  Kinesin walks hand-over-hand.

Authors:  Ahmet Yildiz; Michio Tomishige; Ronald D Vale; Paul R Selvin
Journal:  Science       Date:  2003-12-18       Impact factor: 47.728

5.  A reversible synthetic rotary molecular motor.

Authors:  José V Hernández; Euan R Kay; David A Leigh
Journal:  Science       Date:  2004-11-26       Impact factor: 47.728

6.  A free-running DNA motor powered by a nicking enzyme.

Authors:  Jonathan Bath; Simon J Green; Andrew J Turberfield
Journal:  Angew Chem Int Ed Engl       Date:  2005-07-11       Impact factor: 15.336

7.  Single-polymer Brownian motor: a simulation study.

Authors:  Matthew T Downton; Martin J Zuckermann; Erin M Craig; Michael Plischke; Heiner Linke
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-01-18

8.  Reversible unfolding of individual titin immunoglobulin domains by AFM.

Authors:  M Rief; M Gautel; F Oesterhelt; J M Fernandez; H E Gaub
Journal:  Science       Date:  1997-05-16       Impact factor: 47.728

9.  DNA flexibility studied by covalent closure of short fragments into circles.

Authors:  D Shore; J Langowski; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1981-08       Impact factor: 11.205

10.  Light-driven monodirectional molecular rotor.

Authors:  N Koumura; R W Zijlstra; R A van Delden; N Harada; B L Feringa
Journal:  Nature       Date:  1999-09-09       Impact factor: 49.962

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  3 in total

Review 1.  Thermodynamics and kinetics of molecular motors.

Authors:  R Dean Astumian
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

Review 2.  Synthetic biology approaches to dissecting linear motor protein function: towards the design and synthesis of artificial autonomous protein walkers.

Authors:  Heiner Linke; Birte Höcker; Ken'ya Furuta; Nancy R Forde; Paul M G Curmi
Journal:  Biophys Rev       Date:  2020-07-10

3.  An autonomous and controllable light-driven DNA walking device.

Authors:  Mingxu You; Yan Chen; Xiaobing Zhang; Haipeng Liu; Ruowen Wang; Kelong Wang; Kathryn R Williams; Weihong Tan
Journal:  Angew Chem Int Ed Engl       Date:  2012-02-01       Impact factor: 15.336

  3 in total

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