Literature DB >> 17986439

BlotGlycoABCTM, an integrated glycoblotting technique for rapid and large scale clinical glycomics.

Yoshiaki Miura1, Megumi Hato, Yasuro Shinohara, Hiromitsu Kuramoto, Jun-ichi Furukawa, Masaki Kurogochi, Hideyuki Shimaoka, Mitsuhiro Tada, Kazuaki Nakanishi, Michitaka Ozaki, Satoru Todo, Shin-Ichiro Nishimura.   

Abstract

Recent progress in mass spectrometry has led to new challenges in glycomics, including the development of rapid glycan enrichment techniques. A facile technique for exploration of a carbohydrate-related biomarker is important because proteomics research targets glycosylation, a posttranslational modification. Here we report an "all-in-one" protocol for high throughput clinical glycomics. This new technique integrates glycoblotting-based glycan enrichment onto the BlotGlycoABC bead, on-bead stabilization of sialic acids, and fluorescent labeling of oligosaccharides in a single workflow on a multiwell filter plate. The advantage of this protocol and MALDI-TOF MS was demonstrated through differentiation of serum N-glycan profiles of subjects with congenital disorders of glycosylation and hepatocellular carcinoma and healthy donors. The method also permitted total cellular glycomics analysis of human prostate cancer cells and normal human prostate epithelial cells. These results demonstrate the potentials of glycan enrichment/processing for biomarker discovery.

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Year:  2007        PMID: 17986439     DOI: 10.1074/mcp.M700377-MCP200

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  25 in total

1.  Reliable LC-MS quantitative glycomics using iGlycoMab stable isotope labeled glycans as internal standards.

Authors:  Shiyue Zhou; Nadia Tello; Alex Harvey; Barry Boyes; Ron Orlando; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-04-09       Impact factor: 3.535

2.  Glycomic analysis by glycoprotein immobilization for glycan extraction and liquid chromatography on microfluidic chip.

Authors:  Shuang Yang; Shadi Toghi Eshghi; Hanching Chiu; Don L DeVoe; Hui Zhang
Journal:  Anal Chem       Date:  2013-10-25       Impact factor: 6.986

3.  Sialic acid-focused quantitative mouse serum glycoproteomics by multiple reaction monitoring assay.

Authors:  Masaki Kurogochi; Takahiko Matsushista; Maho Amano; Jun-ichi Furukawa; Yasuro Shinohara; Masato Aoshima; Shin-Ichiro Nishimura
Journal:  Mol Cell Proteomics       Date:  2010-06-22       Impact factor: 5.911

4.  Gliding Motility of Mycoplasma mobile on Uniform Oligosaccharides.

Authors:  Taishi Kasai; Tasuku Hamaguchi; Makoto Miyata
Journal:  J Bacteriol       Date:  2015-07-06       Impact factor: 3.490

5.  TMEM165 deficiency causes a congenital disorder of glycosylation.

Authors:  François Foulquier; Mustapha Amyere; Jaak Jaeken; Renate Zeevaert; Els Schollen; Valérie Race; Riet Bammens; Willy Morelle; Claire Rosnoblet; Dominique Legrand; Didier Demaegd; Neil Buist; David Cheillan; Nathalie Guffon; Pierre Morsomme; Willem Annaert; Hudson H Freeze; Emile Van Schaftingen; Miikka Vikkula; Gert Matthijs
Journal:  Am J Hum Genet       Date:  2012-06-07       Impact factor: 11.025

6.  Glycoblotting-based high throughput protocol for the structural characterization of hyaluronan degradation products during enzymatic fragmentation.

Authors:  Takayuki Furukawa; Misaki Arai; Fayna Garcia-Martin; Maho Amano; Hiroshi Hinou; Shin-Ichiro Nishimura
Journal:  Glycoconj J       Date:  2012-05-26       Impact factor: 2.916

7.  Threshold in stage-specific embryonic glycotypes uncovered by a full portrait of dynamic N-glycan expression during cell differentiation.

Authors:  Maho Amano; Misa Yamaguchi; Yasuhiro Takegawa; Tadashi Yamashita; Michiyo Terashima; Jun-Ichi Furukawa; Yoshiaki Miura; Yasuro Shinohara; Norimasa Iwasaki; Akio Minami; Shin-Ichiro Nishimura
Journal:  Mol Cell Proteomics       Date:  2009-12-14       Impact factor: 5.911

8.  Glycomic analysis using glycoprotein immobilization for glycan extraction.

Authors:  Shuang Yang; Yan Li; Punit Shah; Hui Zhang
Journal:  Anal Chem       Date:  2013-05-20       Impact factor: 6.986

9.  A comparison of N-glycan profiles in human plasma and vitreous fluid.

Authors:  Saori Inafuku; Kousuke Noda; Maho Amano; Tetsu Ohashi; Chikako Yoshizawa; Wataru Saito; Atsuhiro Kanda; Shin-Ichiro Nishimura; Susumu Ishida
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2014-06-07       Impact factor: 3.117

10.  Protein modifications as potential biomarkers in breast cancer.

Authors:  Hongjun Jin; Richard C Zangar
Journal:  Biomark Insights       Date:  2009-11-30
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