Literature DB >> 17983565

H-NS promotes looped domain formation in the bacterial chromosome.

Maarten C Noom, William W Navarre, Taku Oshima, Gijs J L Wuite, Remus T Dame.   

Abstract

The bacterial chromosome is organized into loops, which constitute topologically isolated domains. It is unclear which proteins are responsible for the formation of the topological barriers between domains. The abundant DNA-binding histone-like nucleoid structuring protein (H-NS) is a key player in the organization and compaction of bacterial chromosomes [1,2]. The protein acts by bridging DNA duplexes [3], thus allowing for the formation of DNA loops. Here, genome-wide studies of H-NS binding suggest that this protein is directly involved in the formation or maintenance of topological domain barriers.

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Year:  2007        PMID: 17983565     DOI: 10.1016/j.cub.2007.09.005

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  46 in total

1.  Galactose repressor mediated intersegmental chromosomal connections in Escherichia coli.

Authors:  Zhong Qian; Emilios K Dimitriadis; Rotem Edgar; Prahathees Eswaramoorthy; Sankar Adhya
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-25       Impact factor: 11.205

2.  H-NS silences gfp, the green fluorescent protein gene: gfpTCD is a genetically Remastered gfp gene with reduced susceptibility to H-NS-mediated transcription silencing and with enhanced translation.

Authors:  Colin P Corcoran; Andrew D S Cameron; Charles J Dorman
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

3.  Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis.

Authors:  Ebru Uyar; Ken Kurokawa; Mika Yoshimura; Shu Ishikawa; Naotake Ogasawara; Taku Oshima
Journal:  J Bacteriol       Date:  2009-01-16       Impact factor: 3.490

4.  Transcriptional Repressor TrmBL2 from Thermococcus kodakarensis Forms Filamentous Nucleoprotein Structures and Competes with Histones for DNA Binding in a Salt- and DNA Supercoiling-dependent Manner.

Authors:  Artem K Efremov; Yuanyuan Qu; Hugo Maruyama; Ci J Lim; Kunio Takeyasu; Jie Yan
Journal:  J Biol Chem       Date:  2015-04-30       Impact factor: 5.157

Review 5.  New insights into transcriptional regulation by H-NS.

Authors:  Ferric C Fang; Sylvie Rimsky
Journal:  Curr Opin Microbiol       Date:  2008-04-02       Impact factor: 7.934

6.  Protein-mediated molecular bridging: a key mechanism in biopolymer organization.

Authors:  Paul A Wiggins; Remus Th Dame; Maarten C Noom; Gijs J L Wuite
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

Review 7.  Bacterial nucleoid-associated proteins, nucleoid structure and gene expression.

Authors:  Shane C Dillon; Charles J Dorman
Journal:  Nat Rev Microbiol       Date:  2010-02-08       Impact factor: 60.633

8.  Lsr2 is a nucleoid-associated protein that targets AT-rich sequences and virulence genes in Mycobacterium tuberculosis.

Authors:  Blair R G Gordon; Yifei Li; Linru Wang; Anna Sintsova; Harm van Bakel; Songhai Tian; William Wiley Navarre; Bin Xia; Jun Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-20       Impact factor: 11.205

9.  The 5.5 protein of phage T7 inhibits H-NS through interactions with the central oligomerization domain.

Authors:  Sabrina S Ali; Emily Beckett; Sandy Jeehoon Bae; William Wiley Navarre
Journal:  J Bacteriol       Date:  2011-07-15       Impact factor: 3.490

10.  Modulation of Rho-dependent transcription termination in Escherichia coli by the H-NS family of proteins.

Authors:  Shivalika Saxena; J Gowrishankar
Journal:  J Bacteriol       Date:  2011-05-20       Impact factor: 3.490

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