Literature DB >> 17954211

Qualitative analysis and quantitative assessment of changes in neutral glycerol lipid molecular species within cells.

Jessica Krank1, Robert C Murphy, Robert M Barkley, Eva Duchoslav, Andrew McAnoy.   

Abstract

Triacylglycerols (TAGs) and diacylglycerols (DAGs) are present in cells as a complex mixture of molecular species that differ in the nature of the fatty acyl groups esterified to the glycerol backbone. In some cases, the molecular weights of these species are identical, confounding assignments of identity and quantity by molecular weight. Electrospray ionization results in the formation of [M+NH4]+ ions that can be collisionally activated to yield an abundant product ion corresponding to the loss of ammonia plus one of the fatty acyl groups as a free carboxylic acid. A method was developed using tandem mass spectrometry (MS) and neutral loss scanning to analyze the complex mixture of TAGs and DAGs present in cells and to quantitatively determine changes in TAGs and DAGs molecular species containing identical fatty acyl groups in an experimental series. Eighteen different deuterium-labeled internal standards were synthesized to serve to normalize the ion signal for each neutral loss scan. An example of the application of this method was in the quantitative analysis of TAG and DAG molecular species present in RAW 264.7 cells treated with a Toll-4 receptor ligand, Kdo2-lipid A, in a time course study.

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Year:  2007        PMID: 17954211     DOI: 10.1016/S0076-6879(07)32001-6

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  27 in total

1.  A mouse macrophage lipidome.

Authors:  Edward A Dennis; Raymond A Deems; Richard Harkewicz; Oswald Quehenberger; H Alex Brown; Stephen B Milne; David S Myers; Christopher K Glass; Gary Hardiman; Donna Reichart; Alfred H Merrill; M Cameron Sullards; Elaine Wang; Robert C Murphy; Christian R H Raetz; Teresa A Garrett; Ziqiang Guan; Andrea C Ryan; David W Russell; Jeffrey G McDonald; Bonne M Thompson; Walter A Shaw; Manish Sud; Yihua Zhao; Shakti Gupta; Mano R Maurya; Eoin Fahy; Shankar Subramaniam
Journal:  J Biol Chem       Date:  2010-10-05       Impact factor: 5.157

Review 2.  The Hepatic Lipidome: A Gateway to Understanding the Pathogenes is of Alcohol-Induced Fatty Liver.

Authors:  Robin D Clugston; Madeleine A Gao; William S Blaner
Journal:  Curr Mol Pharmacol       Date:  2017       Impact factor: 3.339

3.  RNAi-based biosynthetic pathway screens to identify in vivo functions of non-nucleic acid-based metabolites such as lipids.

Authors:  Hongjie Zhang; Nessy Abraham; Liakot A Khan; Verena Gobel
Journal:  Nat Protoc       Date:  2015-04-02       Impact factor: 13.491

4.  A two-helix motif positions the lysophosphatidic acid acyltransferase active site for catalysis within the membrane bilayer.

Authors:  Rosanna M Robertson; Jiangwei Yao; Stefan Gajewski; Gyanendra Kumar; Erik W Martin; Charles O Rock; Stephen W White
Journal:  Nat Struct Mol Biol       Date:  2017-07-17       Impact factor: 15.369

5.  Lipidomics joins the omics evolution.

Authors:  Edward A Dennis
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-11       Impact factor: 11.205

6.  Lipidomics technologies at the end of the first decade and the beginning of the next.

Authors:  Alfred H Merrill; Edward A Dennis; Jeffrey G McDonald; Eoin Fahy
Journal:  Adv Nutr       Date:  2013-09-01       Impact factor: 8.701

7.  Simulation of triacylglycerol ion profiles: bioinformatics for interpretation of triacylglycerol biosynthesis.

Authors:  Rowland H Han; Miao Wang; Xiaoling Fang; Xianlin Han
Journal:  J Lipid Res       Date:  2013-01-30       Impact factor: 5.922

8.  Chlamydia trachomatis Relies on Autonomous Phospholipid Synthesis for Membrane Biogenesis.

Authors:  Jiangwei Yao; Philip T Cherian; Matthew W Frank; Charles O Rock
Journal:  J Biol Chem       Date:  2015-05-20       Impact factor: 5.157

Review 9.  Sum of the parts: mass spectrometry-based metabolomics.

Authors:  Stephen B Milne; Thomas P Mathews; David S Myers; Pavlina T Ivanova; H Alex Brown
Journal:  Biochemistry       Date:  2013-03-07       Impact factor: 3.162

10.  An editor for pathway drawing and data visualization in the Biopathways Workbench.

Authors:  Robert W Byrnes; Dawn Cotter; Andreia Maer; Joshua Li; David Nadeau; Shankar Subramaniam
Journal:  BMC Syst Biol       Date:  2009-10-02
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