Literature DB >> 17940555

8p23.1 duplication syndrome; a novel genomic condition with unexpected complexity revealed by array CGH.

John C K Barber1, Viv K Maloney, Shuwen Huang, David J Bunyan, Lara Cresswell, Esther Kinning, Anna Benson, Tim Cheetham, Jonathan Wyllie, Sally Ann Lynch, Simon Zwolinski, Laura Prescott, Yanick Crow, Rob Morgan, Emma Hobson.   

Abstract

The 8p23.1 deletion syndrome is established but not an equivalent duplication syndrome. Here, we report five patients; a de novo prenatal case and two families in which 8p23.1 duplications have been directly transmitted from mothers to children. Dual-colour fluorescent in situ hybridisation, multiplex ligation-dependent probe amplification analysis and customised oligonucleotide array comparative genomic hybridisation (oaCGH) indicated an approximately 3.75 Mb duplication of most of band 8p23.1 between the olfactory receptor/defensin repeats (ORDRs) in all cases. However, oaCGH revealed an additional duplication of 500 kb adjacent to the proximal ORDR in Family 1 and an additional deletion of 3.14 Mb within the Nablus Mask-Like Facial Syndrome region of 8q22.1 in Family 2. Copy number variation at introns 4-5 of the GATA4 gene was also identified. This 8p23.1 duplication syndrome is associated with a characteristic facial phenotype including a prominent forehead and arched eyebrows. Adrenal insufficiency, Tetralogy of Fallot, partial 2/3 syndactyly of the toes and cleft palate in some individuals may be explained by ascertainment bias, incomplete penetrance and/or the presence of the microdeletion in Family 2. The duplication is compatible with normal early childhood development but, although our adult cases live independent lives with varying degrees of support, learning difficulties have been experienced by some family members. We conclude that the 8p23.1 duplication syndrome is a genomic condition with an emerging but variable phenotype that may be under-diagnosed. Our results demonstrate that direct transmission does not distinguish genuine duplications from euchromatic variants and illustrate the power of array CGH to reveal unexpected additional imbalances in affected patients.

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Year:  2007        PMID: 17940555     DOI: 10.1038/sj.ejhg.5201932

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  23 in total

1.  Recurrent deletions and reciprocal duplications of 10q11.21q11.23 including CHAT and SLC18A3 are likely mediated by complex low-copy repeats.

Authors:  Paweł Stankiewicz; Shashikant Kulkarni; Avinash V Dharmadhikari; Srirangan Sampath; Samarth S Bhatt; Tamim H Shaikh; Zhilian Xia; Amber N Pursley; M Lance Cooper; Marwan Shinawi; Alex R Paciorkowski; Dorothy K Grange; Michael J Noetzel; Scott Saunders; Paul Simons; Marshall Summar; Brendan Lee; Fernando Scaglia; Florence Fellmann; Danielle Martinet; Jacques S Beckmann; Alexander Asamoah; Kathryn Platky; Susan Sparks; Ann S Martin; Suneeta Madan-Khetarpal; Jacqueline Hoover; Livija Medne; Carsten G Bonnemann; John B Moeschler; Stephanie E Vallee; Sumit Parikh; Polly Irwin; Victoria P Dalzell; Wendy E Smith; Valerie C Banks; David B Flannery; Carolyn M Lovell; Gary A Bellus; Kathryn Golden-Grant; Jerome L Gorski; Jennifer L Kussmann; Tracy L McGregor; Rizwan Hamid; Jean Pfotenhauer; Blake C Ballif; Chad A Shaw; Sung-Hae L Kang; Carlos A Bacino; Ankita Patel; Jill A Rosenfeld; Sau Wai Cheung; Lisa G Shaffer
Journal:  Hum Mutat       Date:  2011-11-02       Impact factor: 4.878

2.  Rare copy number variations in congenital heart disease patients identify unique genes in left-right patterning.

Authors:  Khalid A Fakhro; Murim Choi; Stephanie M Ware; John W Belmont; Jeffrey A Towbin; Richard P Lifton; Mustafa K Khokha; Martina Brueckner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-31       Impact factor: 11.205

3.  Further delineation of the 15q13 microdeletion and duplication syndromes: a clinical spectrum varying from non-pathogenic to a severe outcome.

Authors:  B W M van Bon; H C Mefford; B Menten; D A Koolen; A J Sharp; W M Nillesen; J W Innis; T J L de Ravel; C L Mercer; M Fichera; H Stewart; L E Connell; K Ounap; K Lachlan; B Castle; N Van der Aa; C van Ravenswaaij; M A Nobrega; C Serra-Juhé; I Simonic; N de Leeuw; R Pfundt; E M Bongers; C Baker; P Finnemore; S Huang; V K Maloney; J A Crolla; M van Kalmthout; M Elia; G Vandeweyer; J P Fryns; S Janssens; N Foulds; S Reitano; K Smith; S Parkel; B Loeys; C G Woods; A Oostra; F Speleman; A C Pereira; A Kurg; L Willatt; S J L Knight; J R Vermeesch; C Romano; J C Barber; G Mortier; L A Pérez-Jurado; F Kooy; H G Brunner; E E Eichler; T Kleefstra; B B A de Vries
Journal:  J Med Genet       Date:  2009-04-15       Impact factor: 6.318

4.  Molecular and clinical characterization of de novo and familial cases with microduplication 3q29: guidelines for copy number variation case reporting.

Authors:  S Goobie; J Knijnenburg; D Fitzpatrick; F H Sharkey; A C Lionel; C R Marshall; T Azam; M Shago; K Chong; R Mendoza-Londono; N S den Hollander; C Ruivenkamp; E Maher; H J Tanke; K Szuhai; R F Wintle; S W Scherer
Journal:  Cytogenet Genome Res       Date:  2009-03-11       Impact factor: 1.636

5.  A potential relationship among beta-defensins haplotype, SOX7 duplication and cardiac defects.

Authors:  Fei Long; Xike Wang; Shaohai Fang; Yuejuan Xu; Kun Sun; Sun Chen; Rang Xu
Journal:  PLoS One       Date:  2013-08-29       Impact factor: 3.240

6.  Identification of novel candidate gene loci and increased sex chromosome aneuploidy among infants with conotruncal heart defects.

Authors:  Kazutoyo Osoegawa; David M Iovannisci; Bin Lin; Christina Parodi; Kathleen Schultz; Gary M Shaw; Edward J Lammer
Journal:  Am J Med Genet A       Date:  2013-10-11       Impact factor: 2.802

7.  Neocentromeres to the Rescue of Acentric Chromosome Fragments.

Authors:  Martin Poot
Journal:  Mol Syndromol       Date:  2017-10-11

8.  The general anesthesia experience of deletion 8p syndrome patient -A case report-.

Authors:  Woo Jong Shin; Sang Duk Kim; Kyoung Hun Kim
Journal:  Korean J Anesthesiol       Date:  2011-10-22

9.  16p11.2-p12.2 duplication syndrome; a genomic condition differentiated from euchromatic variation of 16p11.2.

Authors:  John C K Barber; Victoria Hall; Viv K Maloney; Shuwen Huang; Angharad M Roberts; Angela F Brady; Nicki Foulds; Beverley Bewes; Marianne Volleth; Thomas Liehr; Karl Mehnert; Mark Bateman; Helen White
Journal:  Eur J Hum Genet       Date:  2012-07-25       Impact factor: 4.246

10.  8p23.1 duplication syndrome differentiated from copy number variation of the defensin cluster at prenatal diagnosis in four new families.

Authors:  John Ck Barber; Dave Bunyan; Merryl Curtis; Denise Robinson; Susanne Morlot; Anette Dermitzel; Thomas Liehr; Claudia Alves; Joana Trindade; Ana I Paramos; Clare Cooper; Kevin Ocraft; Emma-Jane Taylor; Viv K Maloney
Journal:  Mol Cytogenet       Date:  2010-02-18       Impact factor: 2.009

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