Literature DB >> 17939983

Quasi-species evolution in subdivided populations favours maximally deleterious mutations.

Brendan D O'Fallon1, Frederick R Adler, Stephen R Proulx.   

Abstract

Most models of quasi-species evolution predict that populations will evolve to occupy areas of sequence space with the greatest concentration of neutral sequences, thus minimizing the deleterious mutation rate and creating mutationally 'robust' genomes. In contrast, empirical studies of the principal model of quasi-species evolution, RNA viruses, suggest that the effects of deleterious mutations are more severe than in similar DNA-based microbes. We demonstrate that populations divided into discrete patches connected by dispersal may favour genotypes where the deleterious effect of non-neutral mutations is maximized. This effect is especially strong in the absence of back mutation and when the amount of time spent in hosts prior to dispersal is intermediate. Our results indicate that RNA viruses that produce acute infections initiated by a small number of virions are expected to evolve fragile genetic architectures when compared with other RNA viruses.

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Year:  2007        PMID: 17939983      PMCID: PMC2293948          DOI: 10.1098/rspb.2007.1228

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  32 in total

1.  Neutral evolution of mutational robustness.

Authors:  E van Nimwegen; J P Crutchfield; M Huynen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Modeling evolutionary landscapes: mutational stability, topology, and superfunnels in sequence space.

Authors:  E Bornberg-Bauer; H S Chan
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

3.  Effect of population patchiness and migration rates on the adaptation and divergence of vesicular stomatitis virus quasispecies populations.

Authors:  Rosario Miralles; Andrés Moya; Santiago F Elena
Journal:  J Gen Virol       Date:  1999-08       Impact factor: 3.891

4.  Interaction between directional epistasis and average mutational effects.

Authors:  C O Wilke; C Adami
Journal:  Proc Biol Sci       Date:  2001-07-22       Impact factor: 5.349

Review 5.  Perspective: Evolution and detection of genetic robustness.

Authors:  J Arjan G M de Visser; Joachim Hermisson; Günter P Wagner; Lauren Ancel Meyers; Homayoun Bagheri-Chaichian; Jeffrey L Blanchard; Lin Chao; James M Cheverud; Santiago F Elena; Walter Fontana; Greg Gibson; Thomas F Hansen; David Krakauer; Richard C Lewontin; Charles Ofria; Sean H Rice; George von Dassow; Andreas Wagner; Michael C Whitlock
Journal:  Evolution       Date:  2003-09       Impact factor: 3.694

6.  Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population.

Authors:  Marco Vignuzzi; Jeffrey K Stone; Jamie J Arnold; Craig E Cameron; Raul Andino
Journal:  Nature       Date:  2005-12-04       Impact factor: 49.962

Review 7.  Mechanisms of genetic robustness in RNA viruses.

Authors:  Santiago F Elena; Purificación Carrasco; José-Antonio Daròs; Rafael Sanjuán
Journal:  EMBO Rep       Date:  2006-02       Impact factor: 8.807

8.  Stationary mutant distributions and evolutionary optimization.

Authors:  P Schuster; J Swetina
Journal:  Bull Math Biol       Date:  1988       Impact factor: 1.758

Review 9.  Quasispecies, error catastrophe, and the antiviral activity of ribavirin.

Authors:  Jason D Graci; Craig E Cameron
Journal:  Virology       Date:  2002-07-05       Impact factor: 3.616

10.  Error thresholds and the constraints to RNA virus evolution.

Authors:  Edward C Holmes
Journal:  Trends Microbiol       Date:  2003-12       Impact factor: 17.079

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  3 in total

1.  Why are viral genomes so fragile? The bottleneck hypothesis.

Authors:  Nono S C Merleau; Sophie Pénisson; Philip J Gerrish; Santiago F Elena; Matteo Smerlak
Journal:  PLoS Comput Biol       Date:  2021-07-08       Impact factor: 4.475

2.  The relationship between the error catastrophe, survival of the flattest, and natural selection.

Authors:  Héctor Tejero; Arturo Marín; Francisco Montero
Journal:  BMC Evol Biol       Date:  2011-01-04       Impact factor: 3.260

3.  Adapting the engine to the fuel: mutator populations can reduce the mutational load by reorganizing their genome structure.

Authors:  Jacob Pieter Rutten; Paulien Hogeweg; Guillaume Beslon
Journal:  BMC Evol Biol       Date:  2019-10-18       Impact factor: 3.260

  3 in total

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