Literature DB >> 17936658

Polynomially scaling spin dynamics simulation algorithm based on adaptive state-space restriction.

Ilya Kuprov1, Nicola Wagner-Rundell, P J Hore.   

Abstract

We report progress with an old problem in magnetic resonance -- that of the exponential scaling of simulation complexity with the number of spins. It is demonstrated below that a polynomially scaling algorithm can be obtained (and accurate simulations performed for over 200 coupled spins) if the dimension of the Liouville state space is reduced by excluding unimportant and unpopulated spin states. We found the class of such states to be surprisingly wide. It actually appears that a majority of states in large spin systems are not essential in magnetic resonance simulations and can safely be dropped from the state space. In restricted state spaces the spin dynamics simulations scale polynomially. In cases of favourable interaction topologies (sparse graphs, e.g. in protein NMR) the asymptotic scaling is linear, opening the way to direct fitting of molecular structures to experimental spectra.

Mesh:

Substances:

Year:  2007        PMID: 17936658     DOI: 10.1016/j.jmr.2007.09.014

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  Chemical magnetoreception in birds: the radical pair mechanism.

Authors:  Christopher T Rodgers; P J Hore
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-07       Impact factor: 11.205

2.  Feynman's clock, a new variational principle, and parallel-in-time quantum dynamics.

Authors:  Jarrod R McClean; John A Parkhill; Alán Aspuru-Guzik
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

3.  Proton-driven spin diffusion in rotating solids via reversible and irreversible quantum dynamics.

Authors:  Mikhail Veshtort; Robert G Griffin
Journal:  J Chem Phys       Date:  2011-10-07       Impact factor: 3.488

4.  Numerical recipes for faster MAS-DNP simulations.

Authors:  Frederic Mentink-Vigier
Journal:  J Magn Reson       Date:  2021-11-09       Impact factor: 2.229

5.  Mechanism of Electron Spin Decoherence in a Partially Deuterated Glassy Matrix.

Authors:  Samuel M Jahn; Elizabeth R Canarie; Stefan Stoll
Journal:  J Phys Chem Lett       Date:  2022-06-10       Impact factor: 6.888

6.  Accessing long-lived nuclear singlet states between chemically equivalent spins without breaking symmetry.

Authors:  Yesu Feng; Ryan M Davis; Warren S Warren
Journal:  Nat Phys       Date:  2012-09-16       Impact factor: 20.034

7.  SpinDynamica: Symbolic and numerical magnetic resonance in a Mathematica environment.

Authors:  Christian Bengs; Malcolm H Levitt
Journal:  Magn Reson Chem       Date:  2017-09-20       Impact factor: 2.447

8.  Large-scale NMR simulations in liquid state: A tutorial.

Authors:  Ilya Kuprov
Journal:  Magn Reson Chem       Date:  2017-11-27       Impact factor: 2.447

9.  How do phonons relax molecular spins?

Authors:  Alessandro Lunghi; Stefano Sanvito
Journal:  Sci Adv       Date:  2019-09-27       Impact factor: 14.136

10.  Proton Detected Solid-State NMR of Membrane Proteins at 28 Tesla (1.2 GHz) and 100 kHz Magic-Angle Spinning.

Authors:  Evgeny Nimerovsky; Kumar Tekwani Movellan; Xizhou Cecily Zhang; Marcel C Forster; Eszter Najbauer; Kai Xue; Rıza Dervişoǧlu; Karin Giller; Christian Griesinger; Stefan Becker; Loren B Andreas
Journal:  Biomolecules       Date:  2021-05-18
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.