Literature DB >> 34837803

Numerical recipes for faster MAS-DNP simulations.

Frederic Mentink-Vigier1.   

Abstract

Numerical simulations of Magic Angle Spinning Dynamic Nuclear Polarization (MAS-DNP) have transformed the way the DNP process is understood in rotating samples. In 2012, two methods were concomitantly developed to simulate small spin systems (< 4 spin-1/2). The development of new polarizing agents, including those containing metal centers with S > 1/2, makes it necessary to further expand the numerical tools with minimal approximations that will help rationalize the experimental observations and build approximate models. In this paper, three strategies developed in the past five years are presented: an adaptive integration scheme, a hybrid Hilbert/Liouville formalism, and a method to truncate the Liouville space basis for periodic Hamiltonian. Each of these methods enable time savings ranging from a factor of 3 to > 100. We illustrate the code performance by reporting for the first time the MAS-DNP field profiles for "AMUPol", in which the couplings to the nitrogen nuclei are explicitly considered, as well as Cross-Effect MAS-DNP field profiles with two electrons spin 5/2 interacting with a nuclear spin 1/2.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cross-Effect; Hilbert space; Liouville space; MAS-DNP; Numerical integration; Relaxation; Simulations; Solid-Effect

Mesh:

Year:  2021        PMID: 34837803      PMCID: PMC8639796          DOI: 10.1016/j.jmr.2021.107106

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  83 in total

1.  Strategies for state space restriction in densely coupled spin systems with applications to spin chemistry.

Authors:  H J Hogben; P J Hore; Ilya Kuprov
Journal:  J Chem Phys       Date:  2010-05-07       Impact factor: 3.488

2.  Polynomially scaling spin dynamics II: further state-space compression using Krylov subspace techniques and zero track elimination.

Authors:  Ilya Kuprov
Journal:  J Magn Reson       Date:  2008-08-27       Impact factor: 2.229

3.  A Magic Angle Spinning Activated 17O DNP Raser.

Authors:  Michael A Hope; Snædís Björgvinsdóttir; Clare P Grey; Lyndon Emsley
Journal:  J Phys Chem Lett       Date:  2020-12-23       Impact factor: 6.475

4.  Large-scale ab initio simulations of MAS DNP enhancements using a Monte Carlo optimization strategy.

Authors:  Frédéric A Perras; Marek Pruski
Journal:  J Chem Phys       Date:  2018-10-21       Impact factor: 3.488

5.  Arabinosyl Deacetylase Modulates the Arabinoxylan Acetylation Profile and Secondary Wall Formation.

Authors:  Lanjun Zhang; Chengxu Gao; Frederic Mentink-Vigier; Lu Tang; Dongmei Zhang; Shaogan Wang; Shaoxue Cao; Zuopeng Xu; Xiangling Liu; Tuo Wang; Yihua Zhou; Baocai Zhang
Journal:  Plant Cell       Date:  2019-03-18       Impact factor: 11.277

6.  Optimizing nitroxide biradicals for cross-effect MAS-DNP: the role of g-tensors' distance.

Authors:  Frédéric Mentink-Vigier
Journal:  Phys Chem Chem Phys       Date:  2020-01-30       Impact factor: 3.676

7.  Site-specific dynamic nuclear polarization in a Gd(III)-labeled protein.

Authors:  Jörg Heiliger; Tobias Matzel; Erhan Can Çetiner; Harald Schwalbe; Georg Kuenze; Björn Corzilius
Journal:  Phys Chem Chem Phys       Date:  2020-11-18       Impact factor: 3.676

8.  Pushing NMR sensitivity limits using dynamic nuclear polarization with closed-loop cryogenic helium sample spinning.

Authors:  E Bouleau; P Saint-Bonnet; F Mentink-Vigier; H Takahashi; J-F Jacquot; M Bardet; F Aussenac; A Purea; F Engelke; S Hediger; D Lee; G De Paëpe
Journal:  Chem Sci       Date:  2015-08-26       Impact factor: 9.825

9.  Colloidal-ALD-Grown Core/Shell CdSe/CdS Nanoplatelets as Seen by DNP Enhanced PASS-PIETA NMR Spectroscopy.

Authors:  Laura Piveteau; Dmitry N Dirin; Christopher P Gordon; Brennan J Walder; Ta-Chung Ong; Lyndon Emsley; Christophe Copéret; Maksym V Kovalenko
Journal:  Nano Lett       Date:  2020-04-29       Impact factor: 11.189

10.  The distance between g-tensors of nitroxide biradicals governs MAS-DNP performance: The case of the bTurea family.

Authors:  Frédéric Mentink-Vigier; Thierry Dubroca; Johan Van Tol; Snorri Th Sigurdsson
Journal:  J Magn Reson       Date:  2021-06-24       Impact factor: 2.734

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  1 in total

1.  Spinning-Driven Dynamic Nuclear Polarization with Optical Pumping.

Authors:  Krishnendu Kundu; Thierry Dubroca; Vinayak Rane; Frederic Mentink-Vigier
Journal:  J Phys Chem A       Date:  2022-04-13       Impact factor: 2.944

  1 in total

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