Literature DB >> 17932686

Interactions of lipids with aquaporin-0 and other membrane proteins.

Richard K Hite1, Tamir Gonen, Stephen C Harrison, Thomas Walz.   

Abstract

The structure of aquaporin-0 (AQP0) has recently been determined by electron crystallography of two-dimensional (2D) crystals and by X-ray crystallography of three-dimensional (3D) crystals. The electron crystallographic structure revealed nine lipids per AQP0 monomer, which form an almost complete bilayer. The lipids adopt a wide variety of conformations and tightly fill the space between adjacent AQP0 tetramers. The conformations of the lipid acyl chains appear to be determined not only by the protein surface but also by the acyl chains of adjacent lipid molecules. In the X-ray structure, the hydrophobic region of the protein is surrounded by a detergent micelle, with two ordered detergent molecules per AQP0 monomer. Despite the different environments, the electron crystallographic and X-ray structures of AQP0 are virtually identical, but they differ in the temperature factors of the atoms that either contact the lipids in the 2D crystals or are exposed to detergents in the 3D crystals. The temperature factors are higher in the X-ray structure, suggesting that the detergent-exposed AQP0 residues are less ordered than the corresponding ones contacting lipids in the 2D crystals. An examination of ordered detergent molecules in crystal structures of other aquaporins and of lipid molecules in 2D and 3D crystals of bacteriorhodopsin suggests that the increased conformational variability of detergent-exposed residues compared to lipid-contacting residues is a general feature.

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Year:  2007        PMID: 17932686      PMCID: PMC2682226          DOI: 10.1007/s00424-007-0353-9

Source DB:  PubMed          Journal:  Pflugers Arch        ISSN: 0031-6768            Impact factor:   3.657


  25 in total

1.  Crystallization of bacteriorhodopsin from bicelle formulations at room temperature.

Authors:  Salem Faham; Gabriella L Boulting; Elizabeth A Massey; Sarah Yohannan; Dawn Yang; James U Bowie
Journal:  Protein Sci       Date:  2005-02-02       Impact factor: 6.725

Review 2.  Revival of electron crystallography.

Authors:  Richard K Hite; Stefan Raunser; Thomas Walz
Journal:  Curr Opin Struct Biol       Date:  2007-08-27       Impact factor: 6.809

3.  Structure of fully hydrated fluid phase DMPC and DLPC lipid bilayers using X-ray scattering from oriented multilamellar arrays and from unilamellar vesicles.

Authors:  Norbert Kucerka; Yufeng Liu; Nanjun Chu; Horia I Petrache; Stephanie Tristram-Nagle; John F Nagle
Journal:  Biophys J       Date:  2005-01-21       Impact factor: 4.033

4.  The supramolecular architecture of junctional microdomains in native lens membranes.

Authors:  Nikolay Buzhynskyy; Richard K Hite; Thomas Walz; Simon Scheuring
Journal:  EMBO Rep       Date:  2006-11-24       Impact factor: 8.807

5.  Structural determinants of water permeation through aquaporin-1.

Authors:  K Murata; K Mitsuoka; T Hirai; T Walz; P Agre; J B Heymann; A Engel; Y Fujiyoshi
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

6.  Structure of a glycerol-conducting channel and the basis for its selectivity.

Authors:  D Fu; A Libson; L J Miercke; C Weitzman; P Nollert; J Krucinski; R M Stroud
Journal:  Science       Date:  2000-10-20       Impact factor: 47.728

Review 7.  How lipids affect the activities of integral membrane proteins.

Authors:  Anthony G Lee
Journal:  Biochim Biophys Acta       Date:  2004-11-03

8.  The molecular structure of lecithin dihydrate.

Authors:  R H Pearson; I Pascher
Journal:  Nature       Date:  1979-10-11       Impact factor: 49.962

9.  The channel architecture of aquaporin 0 at a 2.2-A resolution.

Authors:  William E C Harries; David Akhavan; Larry J W Miercke; Shahram Khademi; Robert M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

10.  X-ray structure analysis of a membrane protein complex. Electron density map at 3 A resolution and a model of the chromophores of the photosynthetic reaction center from Rhodopseudomonas viridis.

Authors:  J Deisenhofer; O Epp; K Miki; R Huber; H Michel
Journal:  J Mol Biol       Date:  1984-12-05       Impact factor: 5.469

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  21 in total

1.  Peptide model helices in lipid membranes: insertion, positioning, and lipid response on aggregation studied by X-ray scattering.

Authors:  Philipp E Schneggenburger; André Beerlink; Britta Weinhausen; Tim Salditt; Ulf Diederichsen
Journal:  Eur Biophys J       Date:  2010-12-23       Impact factor: 1.733

Review 2.  Junction-forming aquaporins.

Authors:  Andreas Engel; Yoshinori Fujiyoshi; Tamir Gonen; Thomas Walz
Journal:  Curr Opin Struct Biol       Date:  2008-01-14       Impact factor: 6.809

3.  Introduction for Special issue for Aquaporin: expanding the world of aquaporins: new members and new functions.

Authors:  Sei Sasaki
Journal:  Pflugers Arch       Date:  2008-01-19       Impact factor: 3.657

4.  Lipid dynamics and protein-lipid interactions in 2D crystals formed with the β-barrel integral membrane protein VDAC1.

Authors:  Matthew T Eddy; Ta-Chung Ong; Lindsay Clark; Oscar Teijido; Patrick C A van der Wel; Robert Garces; Gerhard Wagner; Tatiana K Rostovtseva; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2012-03-30       Impact factor: 15.419

5.  Glycerol uptake by erythrocytes from warm- and cold-acclimated Cope's gray treefrogs.

Authors:  David L Goldstein; James Frisbie; Andrew Diller; Ram Naresh Pandey; Carissa M Krane
Journal:  J Comp Physiol B       Date:  2010-07-22       Impact factor: 2.200

6.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
Journal:  Chem Rev       Date:  2019-02-13       Impact factor: 60.622

7.  Principles of membrane protein interactions with annular lipids deduced from aquaporin-0 2D crystals.

Authors:  Richard K Hite; Zongli Li; Thomas Walz
Journal:  EMBO J       Date:  2010-04-13       Impact factor: 11.598

8.  The water permeability of lens aquaporin-0 depends on its lipid bilayer environment.

Authors:  Jihong Tong; John T Canty; Margaret M Briggs; Thomas J McIntosh
Journal:  Exp Eye Res       Date:  2013-05-13       Impact factor: 3.467

9.  Single copies of Sec61 and TRAP associate with a nontranslating mammalian ribosome.

Authors:  Jean-François Ménétret; Ramanujan S Hegde; Mike Aguiar; Steven P Gygi; Eunyong Park; Tom A Rapoport; Christopher W Akey
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

Review 10.  Electron crystallography of aquaporins.

Authors:  Simeon Andrews; Steve L Reichow; Tamir Gonen
Journal:  IUBMB Life       Date:  2008-07       Impact factor: 3.885

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