Literature DB >> 17930288

Linking fast and slow positive feedback loops creates an optimal bistable switch in cell signaling.

Xiao-Peng Zhang1, Zhang Cheng, Feng Liu, Wei Wang.   

Abstract

Interlinked positive feedback loops are frequently found in biological signaling pathways. It is intriguing to study the dynamics, functions, and robustness of these motifs. Using numerical simulations and theoretical analysis, here we explore the sensitiveness and robustness of positive feedback loops with various time scales. Both single and dual loops can behave as a bistable switch. We study the responses of five types of bistable switches to noisy stimuli. The noise-induced transitions between two states are discussed in detail by using energy landscape. The dual-time switch, consisting of interconnected fast and slow loops, is both sensitive to stimuli and resistant to fluctuations in stimulus. This provides a novel mechanism for creating optimal bistable switches and memory modules. Our results also suggest that the dual-time switch can act as a ubiquitous motif with sensitive robustness in biological systems.

Mesh:

Year:  2007        PMID: 17930288     DOI: 10.1103/PhysRevE.76.031924

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  14 in total

1.  The sensitivity of memory consolidation and reconsolidation to inhibitors of protein synthesis and kinases: computational analysis.

Authors:  Yili Zhang; Paul Smolen; Douglas A Baxter; John H Byrne
Journal:  Learn Mem       Date:  2010-08-24       Impact factor: 2.460

2.  Functional characteristics of a double negative feedback loop mediated by microRNAs.

Authors:  Shuiming Cai; Peipei Zhou; Zengrong Liu
Journal:  Cogn Neurodyn       Date:  2013-01-05       Impact factor: 5.082

3.  Coupling between feedback loops in autoregulatory networks affects bistability range, open-loop gain and switching times.

Authors:  Abhinav Tiwari; Oleg A Igoshin
Journal:  Phys Biol       Date:  2012-09-25       Impact factor: 2.583

4.  A critical quantity for noise attenuation in feedback systems.

Authors:  Liming Wang; Jack Xin; Qing Nie
Journal:  PLoS Comput Biol       Date:  2010-04-29       Impact factor: 4.475

5.  Cell fate decision mediated by p53 pulses.

Authors:  Xiao-Peng Zhang; Feng Liu; Zhang Cheng; Wei Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-15       Impact factor: 11.205

6.  Interlinked dual-time feedback loops can enhance robustness to stochasticity and persistence of memory.

Authors:  Paul Smolen; Douglas A Baxter; John H Byrne
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-03-04

7.  Coherent activation of a synthetic mammalian gene network.

Authors:  Diane M Longo; Alexander Hoffmann; Lev S Tsimring; Jeff Hasty
Journal:  Syst Synth Biol       Date:  2009-09-11

8.  Interlinked GTPase cascades provide a motif for both robust switches and oscillators.

Authors:  Andreas Ehrmann; Basile Nguyen; Udo Seifert
Journal:  J R Soc Interface       Date:  2019-08-07       Impact factor: 4.118

9.  Control of MarRAB Operon in Escherichia coli via Autoactivation and Autorepression.

Authors:  Mahendra Kumar Prajapat; Kirti Jain; Supreet Saini
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

10.  MicroRNA-mediated positive feedback loop and optimized bistable switch in a cancer network Involving miR-17-92.

Authors:  Yichen Li; Yumin Li; Hui Zhang; Yong Chen
Journal:  PLoS One       Date:  2011-10-14       Impact factor: 3.240

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