Literature DB >> 17925006

Transcriptional instability is not a universal attribute of aging.

Luigi A Warren1, Derrick J Rossi, Geoffrey R Schiebinger, Irving L Weissman, Stuart K Kim, Stephen R Quake.   

Abstract

It has been proposed that cumulative somatic mutations contribute to the aging process by disrupting the transcriptional networks that regulate cell structure and function. Experimental support for this model emerged from a recent study of cardiomyocytes that showed a dramatic increase in the transcriptional heterogeneity of these long-lived postmitotic cells with age. To determine if regulatory instability is a hallmark of aging in renewing tissues, we evaluated gene expression noise in four hematopoietic cell types: stem cells, granulocytes, naïve B cells and naïve T cells. We used flow cytometry to purify phenotypically equivalent cells from young and old mice, and applied multiplexed quantitative reverse transcription-polymerase chain reaction to measure the copy number of six different mRNA transcripts in 324 individual cells. There was a trend toward higher transcript levels in cells isolated from old animals, but no significant increase in transcriptional heterogeneity with age was found in the surveyed populations. Flow cytometric analysis of membrane protein expression also indicated that cell-to-cell variability was unaffected by age. We conclude that large-scale regulatory destabilization is not a universal concomitant of aging, and may be of significance as an aging mechanism primarily in nonrenewing tissues.

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Year:  2007        PMID: 17925006     DOI: 10.1111/j.1474-9726.2007.00337.x

Source DB:  PubMed          Journal:  Aging Cell        ISSN: 1474-9718            Impact factor:   9.304


  32 in total

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Review 2.  Epigenetic regulation of ageing: linking environmental inputs to genomic stability.

Authors:  Bérénice A Benayoun; Elizabeth A Pollina; Anne Brunet
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-16       Impact factor: 94.444

Review 3.  Dark matters in AMD genetics: epigenetics and stochasticity.

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4.  Analysis of gene expression at the single-cell level using microdroplet-based microfluidic technology.

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Journal:  Biomicrofluidics       Date:  2011-06-03       Impact factor: 2.800

Review 5.  Epigenetics of T cell aging.

Authors:  Jörg J Goronzy; Bin Hu; Chulwoo Kim; Rohit R Jadhav; Cornelia M Weyand
Journal:  J Leukoc Biol       Date:  2018-06-27       Impact factor: 4.962

Review 6.  Mesenchymal stem cell-derived inflammatory fibroblasts mediate interstitial fibrosis in the aging heart.

Authors:  JoAnn Trial; Mark L Entman; Katarzyna A Cieslik
Journal:  J Mol Cell Cardiol       Date:  2015-12-22       Impact factor: 5.000

7.  Sirtuins at the breaking point: SIRT6 in DNA repair.

Authors:  David B Lombard
Journal:  Aging (Albany NY)       Date:  2009-01-20       Impact factor: 5.682

8.  H3K4me3 breadth is linked to cell identity and transcriptional consistency.

Authors:  Bérénice A Benayoun; Elizabeth A Pollina; Duygu Ucar; Salah Mahmoudi; Kalpana Karra; Edith D Wong; Keerthana Devarajan; Aaron C Daugherty; Anshul B Kundaje; Elena Mancini; Benjamin C Hitz; Rakhi Gupta; Thomas A Rando; Julie C Baker; Michael P Snyder; J Michael Cherry; Anne Brunet
Journal:  Cell       Date:  2014-07-31       Impact factor: 41.582

Review 9.  Stem cells and aging in the hematopoietic system.

Authors:  Luigi A Warren; Derrick J Rossi
Journal:  Mech Ageing Dev       Date:  2008-04-08       Impact factor: 5.432

10.  Aging mice show a decreasing correlation of gene expression within genetic modules.

Authors:  Lucinda K Southworth; Art B Owen; Stuart K Kim
Journal:  PLoS Genet       Date:  2009-12-18       Impact factor: 5.917

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