Literature DB >> 17922011

Conformational dynamics of the KcsA potassium channel governs gating properties.

Kent A Baker1, Christos Tzitzilonis, Witek Kwiatkowski, Senyon Choe, Roland Riek.   

Abstract

K+ channels conduct and regulate K+ flux across the cell membrane. Several crystal structures and biophysical studies of tetrameric ion channels have revealed many of the structural details of ion selectivity and gating. A narrow pore lined with four arrays of carbonyl groups is responsible for ion selectivity, whereas a conformational change of the four inner transmembrane helices (TM2) is involved in gating. We used NMR to examine full-length KcsA, a prototypical K+ channel, in its open, closed and intermediate states. These studies reveal that at least two conformational states exist both in the selectivity filter and near the C-terminal ends of the TM2 helices. In the ion-conducting open state, we observed rapid structural exchange between two conformations of the filter, presumably of low and high K+ affinity, respectively. Such measurements of millisecond-timescale dynamics reveal the basis for simultaneous ion selection and gating.

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Year:  2007        PMID: 17922011      PMCID: PMC3525321          DOI: 10.1038/nsmb1311

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  32 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  Energetics of ion conduction through the K+ channel.

Authors:  S Bernèche; B Roux
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

3.  Structure of the KcsA channel intracellular gate in the open state.

Authors:  Y S Liu; P Sompornpisut; E Perozo
Journal:  Nat Struct Biol       Date:  2001-10

4.  A method for efficient isotopic labeling of recombinant proteins.

Authors:  J Marley; M Lu; C Bracken
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

5.  The structure of the potassium channel: molecular basis of K+ conduction and selectivity.

Authors:  D A Doyle; J Morais Cabral; R A Pfuetzner; A Kuo; J M Gulbis; S L Cohen; B T Chait; R MacKinnon
Journal:  Science       Date:  1998-04-03       Impact factor: 47.728

6.  Probing ion permeation and gating in a K+ channel with backbone mutations in the selectivity filter.

Authors:  T Lu; A Y Ting; J Mainland; L Y Jan; P G Schultz; J Yang
Journal:  Nat Neurosci       Date:  2001-03       Impact factor: 24.884

7.  A computational study of ion binding and protonation states in the KcsA potassium channel.

Authors:  V B Luzhkov; J Aqvist
Journal:  Biochim Biophys Acta       Date:  2000-09-29

8.  Mutations within the P-loop of Kir6.2 modulate the intraburst kinetics of the ATP-sensitive potassium channel.

Authors:  P Proks; C E Capener; P Jones; F M Ashcroft
Journal:  J Gen Physiol       Date:  2001-10       Impact factor: 4.086

9.  Improved sensitivity and coherence selection for [15N,1H]-TROSY elements in triple resonance experiments.

Authors:  M Salzmann; G Wider; K Pervushin; K Wüthrich
Journal:  J Biomol NMR       Date:  1999-10       Impact factor: 2.835

10.  Molecular architecture of full-length KcsA: role of cytoplasmic domains in ion permeation and activation gating.

Authors:  D M Cortes; L G Cuello; E Perozo
Journal:  J Gen Physiol       Date:  2001-02       Impact factor: 4.086

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  56 in total

1.  Potassium channel gating: not an open and shut case.

Authors:  Raymond S Norton; Jacqueline M Gulbis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-14       Impact factor: 11.205

2.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

Authors:  Hak Jun Kim; Stanley C Howell; Wade D Van Horn; Young Ho Jeon; Charles R Sanders
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-11-01       Impact factor: 9.795

3.  Role of protein dynamics in ion selectivity and allosteric coupling in the NaK channel.

Authors:  Joshua B Brettmann; Darya Urusova; Marco Tonelli; Jonathan R Silva; Katherine A Henzler-Wildman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-30       Impact factor: 11.205

4.  Ion-binding properties of a K+ channel selectivity filter in different conformations.

Authors:  Shian Liu; Paul J Focke; Kimberly Matulef; Xuelin Bian; Pierre Moënne-Loccoz; Francis I Valiyaveetil; Steve W Lockless
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-23       Impact factor: 11.205

5.  Atomistic insights into human Cys-loop receptors by solution NMR.

Authors:  David D Mowrey; Monica N Kinde; Yan Xu; Pei Tang
Journal:  Biochim Biophys Acta       Date:  2014-03-28

6.  Crystal structure of full-length KcsA in its closed conformation.

Authors:  Serdar Uysal; Valeria Vásquez; Valentina Tereshko; Kaori Esaki; Frederic A Fellouse; Sachdev S Sidhu; Shohei Koide; Eduardo Perozo; Anthony Kossiakoff
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-03       Impact factor: 11.205

7.  Conformational changes in the selectivity filter of the open-state KcsA channel: an energy minimization study.

Authors:  Gennady V Miloshevsky; Peter C Jordan
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

8.  A green fluorescent protein screen for identification of well-expressed membrane proteins from a cohort of extremophilic organisms.

Authors:  Justus Hammon; Dinesh V Palanivelu; Joy Chen; Chintan Patel; Daniel L Minor
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

9.  NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA.

Authors:  Dejian Ma; Tommy S Tillman; Pei Tang; Eva Meirovitch; Roderic Eckenhoff; Anna Carnini; Yan Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-23       Impact factor: 11.205

Review 10.  Ion channels in microbes.

Authors:  Boris Martinac; Yoshiro Saimi; Ching Kung
Journal:  Physiol Rev       Date:  2008-10       Impact factor: 37.312

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