Literature DB >> 19346472

Crystal structure of full-length KcsA in its closed conformation.

Serdar Uysal1, Valeria Vásquez, Valentina Tereshko, Kaori Esaki, Frederic A Fellouse, Sachdev S Sidhu, Shohei Koide, Eduardo Perozo, Anthony Kossiakoff.   

Abstract

KcsA is a proton-activated, voltage-modulated K(+) channel that has served as the archetype pore domain in the Kv channel superfamily. Here, we have used synthetic antigen-binding fragments (Fabs) as crystallographic chaperones to determine the structure of full-length KcsA at 3.8 A, as well as that of its isolated C-terminal domain at 2.6 A. The structure of the full-length KcsA-Fab complex reveals a well-defined, 4-helix bundle that projects approximately 70 A toward the cytoplasm. This bundle promotes a approximately 15 degree bending in the inner bundle gate, tightening its diameter and shifting the narrowest point 2 turns of helix below. Functional analysis of the full-length KcsA-Fab complex suggests that the C-terminal bundle remains whole during gating. We suggest that this structure likely represents the physiologically relevant closed conformation of KcsA.

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Year:  2009        PMID: 19346472      PMCID: PMC2672561          DOI: 10.1073/pnas.0810663106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  Crystal structure and mechanism of a calcium-gated potassium channel.

Authors:  Youxing Jiang; Alice Lee; Jiayun Chen; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  Nature       Date:  2002-05-30       Impact factor: 49.962

3.  Hanging gondola structure of the T1 domain in a voltage-gated K(+) channel.

Authors:  W R Kobertz; C Williams; C Miller
Journal:  Biochemistry       Date:  2000-08-29       Impact factor: 3.162

Review 4.  Crystallisation of membrane proteins mediated by antibody fragments.

Authors:  Carola Hunte; Hartmut Michel
Journal:  Curr Opin Struct Biol       Date:  2002-08       Impact factor: 6.809

5.  Crystal structure of the potassium channel KirBac1.1 in the closed state.

Authors:  Anling Kuo; Jacqueline M Gulbis; Jennifer F Antcliff; Tahmina Rahman; Edward D Lowe; Jochen Zimmer; Jonathan Cuthbertson; Frances M Ashcroft; Takayuki Ezaki; Declan A Doyle
Journal:  Science       Date:  2003-05-08       Impact factor: 47.728

6.  X-ray structure of a voltage-dependent K+ channel.

Authors:  Youxing Jiang; Alice Lee; Jiayun Chen; Vanessa Ruta; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

7.  Potassium channel gating observed with site-directed mass tagging.

Authors:  Brent L Kelly; Adrian Gross
Journal:  Nat Struct Biol       Date:  2003-04

8.  The crystal structure of Aq_328 from the hyperthermophilic bacteria Aquifex aeolicus shows an ancestral histone fold.

Authors:  Yang Qiu; Valentina Tereshko; Youngchang Kim; Rongguang Zhang; Frank Collart; Mohammed Yousef; Anthony Kossiakoff; Andrzej Joachimiak
Journal:  Proteins       Date:  2006-01-01

9.  KcsA: it's a potassium channel.

Authors:  M LeMasurier; L Heginbotham; C Miller
Journal:  J Gen Physiol       Date:  2001-09       Impact factor: 4.086

10.  Molecular architecture of full-length KcsA: role of cytoplasmic domains in ion permeation and activation gating.

Authors:  D M Cortes; L G Cuello; E Perozo
Journal:  J Gen Physiol       Date:  2001-02       Impact factor: 4.086

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  121 in total

1.  Calcium-dependent conformational changes in inositol trisphosphate receptors.

Authors:  Georgia Anyatonwu; M Tariq Khan; Zachary T Schug; Paula C A da Fonseca; Edward P Morris; Suresh K Joseph
Journal:  J Biol Chem       Date:  2010-06-08       Impact factor: 5.157

2.  Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.

Authors:  Giovanni Gonzalez-Gutierrez; Tiit Lukk; Vinayak Agarwal; David Papke; Satish K Nair; Claudio Grosman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

3.  IBC's 22nd Annual Antibody Engineering and 9th Annual Antibody Therapeutics International Conferences and the 2011 Annual Meeting of The Antibody Society, December 5-8, 2011, San Diego, CA.

Authors:  Johan Nilvebrant; D Cameron Dunlop; Aroop Sircar; Thierry Wurch; Emilia Falkowska; Janice M Reichert; Gustavo Helguera; Emily C Piccione; Simon Brack; Sven Berger
Journal:  MAbs       Date:  2012-03-01       Impact factor: 5.857

4.  Role of the KcsA channel cytoplasmic domain in pH-dependent gating.

Authors:  Minako Hirano; Yukiko Onishi; Toshio Yanagida; Toru Ide
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

5.  Synchrotron radiation circular dichroism spectroscopy-defined structure of the C-terminal domain of NaChBac and its role in channel assembly.

Authors:  Andrew M Powl; Andrias O O'Reilly; Andrew J Miles; B A Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-27       Impact factor: 11.205

6.  Application of protein engineering to enhance crystallizability and improve crystal properties.

Authors:  Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

7.  Membrane region M2C2 in subunit KtrB of the K+ uptake system KtrAB from Vibrio alginolyticus forms a flexible gate controlling K+ flux: an electron paramagnetic resonance study.

Authors:  Inga Hänelt; Dorith Wunnicke; Meike Müller-Trimbusch; Marc Vor der Brüggen; Inga Kraus; Evert P Bakker; Heinz-Jürgen Steinhoff
Journal:  J Biol Chem       Date:  2010-06-23       Impact factor: 5.157

8.  Changes in single K(+) channel behavior induced by a lipid phase transition.

Authors:  Heiko M Seeger; Laura Aldrovandi; Andrea Alessandrini; Paolo Facci
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

9.  Conversion of scFv peptide-binding specificity for crystal chaperone development.

Authors:  Jennifer C Pai; Jeffrey A Culver; Jason E Drury; Rakesh S Motani; Raquel L Lieberman; Jennifer A Maynard
Journal:  Protein Eng Des Sel       Date:  2011-01-08       Impact factor: 1.650

10.  Rapid identification of recombinant Fabs that bind to membrane proteins.

Authors:  Jungmin Kim; Robert M Stroud; Charles S Craik
Journal:  Methods       Date:  2011-09-20       Impact factor: 3.608

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