Literature DB >> 17911412

Toward understanding the core meiotic transcriptome in mammals and its implications for somatic cancer.

Frederic Chalmel1, Aurelie Lardenois, Michael Primig.   

Abstract

Progression through meiotic development is in part controlled by an expression program that coordinates the timing of induction and time of function of numerous loci essential for the process. Whole-genome profiling of male germline expression in mouse, rat, and human provides important clues about the transcriptional regulatory machinery that drives the expression of its target genes. Among several thousand genes differentially expressed between testicular Sertoli and germ cells, a subset of conserved loci display highly similar meiotic and postmeiotic profiles across rodents and Homo sapiens. Mouse genes transcribed in the germline, but not in somatic control tissues, are frequently found to be important for sexual reproduction, thus correlating potentially specific expression and essential function in the male germline. In silico promoter analysis yields insight into DNA sequence conservation and the distribution of known regulatory elements within potential promoter regions of meiotic and postmeiotic genes. Some genes strongly expressed in male gonads are implicated in cancer, thus supporting the idea that gametogenesis and tumorigenesis may share molecular functions. Transcriptome, proteome, and protein network data reveal the kinetics of mRNA synthesis and translation in the germline, and help identify novel potentially important genes previously unassociated with the mammalian male germline.

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Year:  2007        PMID: 17911412     DOI: 10.1196/annals.1411.010

Source DB:  PubMed          Journal:  Ann N Y Acad Sci        ISSN: 0077-8923            Impact factor:   5.691


  10 in total

Review 1.  Testicular postgenomics: targeting the regulation of spermatogenesis.

Authors:  Pierre Calvel; Antoine D Rolland; Bernard Jégou; Charles Pineau
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-05-27       Impact factor: 6.237

2.  Analysis of the Basidiomycete Coprinopsis cinerea reveals conservation of the core meiotic expression program over half a billion years of evolution.

Authors:  Claire Burns; Jason E Stajich; Andreas Rechtsteiner; Lorna Casselton; Sean E Hanlon; Sarah K Wilke; Oleksandr P Savytskyy; Allen C Gathman; Walt W Lilly; Jason D Lieb; Miriam E Zolan; Patricia J Pukkila
Journal:  PLoS Genet       Date:  2010-09-23       Impact factor: 5.917

Review 3.  Monogenic causes of non-obstructive azoospermia: challenges, established knowledge, limitations and perspectives.

Authors:  Laura Kasak; Maris Laan
Journal:  Hum Genet       Date:  2020-01-18       Impact factor: 4.132

4.  An integrative omics strategy to assess the germ cell secretome and to decipher sertoli-germ cell crosstalk in the Mammalian testis.

Authors:  Frédéric Chalmel; Emmanuelle Com; Régis Lavigne; Nolwen Hernio; Ana-Paula Teixeira-Gomes; Jean-Louis Dacheux; Charles Pineau
Journal:  PLoS One       Date:  2014-08-11       Impact factor: 3.240

5.  NF-YB Regulates Spermatogonial Stem Cell Self-Renewal and Proliferation in the Planarian Schmidtea mediterranea.

Authors:  Harini Iyer; James J Collins; Phillip A Newmark
Journal:  PLoS Genet       Date:  2016-06-15       Impact factor: 5.917

6.  Meta-analysis of clinical data using human meiotic genes identifies a novel cohort of highly restricted cancer-specific marker genes.

Authors:  Julia Feichtinger; Ibrahim Aldeailej; Rebecca Anderson; Mikhlid Almutairi; Ahmed Almatrafi; Naif Alsiwiehri; Keith Griffiths; Nicholas Stuart; Jane A Wakeman; Lee Larcombe; Ramsay J McFarlane
Journal:  Oncotarget       Date:  2012-08

7.  The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology.

Authors:  Frédéric Chalmel; Michael Primig
Journal:  BMC Bioinformatics       Date:  2008-02-06       Impact factor: 3.169

8.  Meta-analysis of expression of l(3)mbt tumor-associated germline genes supports the model that a soma-to-germline transition is a hallmark of human cancers.

Authors:  Julia Feichtinger; Lee Larcombe; Ramsay J McFarlane
Journal:  Int J Cancer       Date:  2013-11-15       Impact factor: 7.396

9.  Chromatoid Body Protein TDRD6 Supports Long 3' UTR Triggered Nonsense Mediated mRNA Decay.

Authors:  Grigorios Fanourgakis; Mathias Lesche; Müge Akpinar; Andreas Dahl; Rolf Jessberger
Journal:  PLoS Genet       Date:  2016-05-05       Impact factor: 5.917

10.  Combined RNA/tissue profiling identifies novel Cancer/testis genes.

Authors:  Soazik P Jamin; Feria Hikmet; Romain Mathieu; Bernard Jégou; Cecilia Lindskog; Frédéric Chalmel; Michael Primig
Journal:  Mol Oncol       Date:  2021-06-23       Impact factor: 6.603

  10 in total

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