Literature DB >> 20403865

Testicular postgenomics: targeting the regulation of spermatogenesis.

Pierre Calvel1, Antoine D Rolland, Bernard Jégou, Charles Pineau.   

Abstract

Sperm are, arguably, the most differentiated cells produced within the body of any given species. This is owing to the fact that spermatogenesis is an intricate and highly specialized process evolved to suit the individual particularities of each sexual species. Despite a vast diversity in method, the aim of spermatogenesis is always the same, the idealized transmission of genetic patrimony. Towards this goal certain requirements must always be met, such as a relative twofold reduction in ploidy, repackaging of the chromatin for transport and specialized enhancements for cell motility, recognition and fusion. In the past 20 years, the study of molecular networks coordinating male germ cell development, particularly in mammals, has become more and more facilitated thanks to large-scale analyses of genome expression. Such postgenomic endeavors have generated landscapes of data for both fundamental and clinical reproductive biology. Continuous, large-scale integration analyses of these datasets are undertaken which provide access to very precise information on a myriad of biomolecules. This review presents commonly used transcriptomic and proteomic workflows applied to various testicular germ cell studies. We will also provide a general overview of the technical possibilities available to reproductive genomic biologists, noting the advantages and drawbacks of each technique.

Mesh:

Year:  2010        PMID: 20403865      PMCID: PMC2871924          DOI: 10.1098/rstb.2009.0294

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  140 in total

Review 1.  Specific arrests of spermatogenesis in genetically modified and mutant mice.

Authors:  D G de Rooij; P de Boer
Journal:  Cytogenet Genome Res       Date:  2003       Impact factor: 1.636

2.  A reference map and identification of porcine testis proteins using 2-DE and MS.

Authors:  San-Yuan Huang; Jyh-Hung Lin; Yu-Huey Chen; Chin-kai Chuang; En-Chung Lin; Mu-Chiou Huang; Hsiao-Fang Sunny Sun; Wen-Chuan Lee
Journal:  Proteomics       Date:  2005-11       Impact factor: 3.984

3.  Proteomic analysis of sperm regions that mediate sperm-egg interactions.

Authors:  Kathryn K Stein; Jowell C Go; William S Lane; Paul Primakoff; Diana G Myles
Journal:  Proteomics       Date:  2006-06       Impact factor: 3.984

Review 4.  Small RNA molecules in the regulation of spermatogenesis.

Authors:  Zuping He; Maria Kokkinaki; Disha Pant; G Ian Gallicano; Martin Dym
Journal:  Reproduction       Date:  2009-03-24       Impact factor: 3.906

5.  Multiple glycolytic enzymes are tightly bound to the fibrous sheath of mouse spermatozoa.

Authors:  Michelle Krisfalusi; Kiyoshi Miki; Patricia L Magyar; Deborah A O'Brien
Journal:  Biol Reprod       Date:  2006-05-10       Impact factor: 4.285

6.  Isolation and proteomic analysis of mouse sperm detergent-resistant membrane fractions: evidence for dissociation of lipid rafts during capacitation.

Authors:  Susan B Sleight; Patricia V Miranda; Nia-Washington Plaskett; Bernhard Maier; Jeff Lysiak; Heidi Scrable; John C Herr; Pablo E Visconti
Journal:  Biol Reprod       Date:  2005-05-25       Impact factor: 4.285

7.  Postmeiotic sex chromatin in the male germline of mice.

Authors:  Satoshi H Namekawa; Peter J Park; Li-Feng Zhang; James E Shima; John R McCarrey; Michael D Griswold; Jeannie T Lee
Journal:  Curr Biol       Date:  2006-04-04       Impact factor: 10.834

Review 8.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

9.  Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis.

Authors:  Donglin Liu; J Michael Brockman; Brinda Dass; Lucie N Hutchins; Priyam Singh; John R McCarrey; Clinton C MacDonald; Joel H Graber
Journal:  Nucleic Acids Res       Date:  2006-12-08       Impact factor: 16.971

10.  MicroRNA biogenesis is required for mouse primordial germ cell development and spermatogenesis.

Authors:  Katsuhiko Hayashi; Susana M Chuva de Sousa Lopes; Masahiro Kaneda; Fuchou Tang; Petra Hajkova; Kaiqin Lao; Donal O'Carroll; Partha P Das; Alexander Tarakhovsky; Eric A Miska; M Azim Surani
Journal:  PLoS One       Date:  2008-03-05       Impact factor: 3.240

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  18 in total

1.  The biology of spermatogenesis: the past, present and future.

Authors:  C Yan Cheng; Dolores D Mruk
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-05-27       Impact factor: 6.237

Review 2.  Proteomics and the genetics of sperm chromatin condensation.

Authors:  Rafael Oliva; Judit Castillo
Journal:  Asian J Androl       Date:  2010-11-01       Impact factor: 3.285

Review 3.  Proteomics of spermatogenesis: from protein lists to understanding the regulation of male fertility and infertility.

Authors:  Xiao-Yan Huang; Jia-Hao Sha
Journal:  Asian J Androl       Date:  2010-11-15       Impact factor: 3.285

Review 4.  Bioinformatics for spermatogenesis: annotation of male reproduction based on proteomics.

Authors:  Tao Zhou; Zuo-Min Zhou; Xue-Jiang Guo
Journal:  Asian J Androl       Date:  2013-07-15       Impact factor: 3.285

5.  Male-specific region of the bovine Y chromosome is gene rich with a high transcriptomic activity in testis development.

Authors:  Ti-Cheng Chang; Yang Yang; Ernest F Retzel; Wan-Sheng Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-10       Impact factor: 11.205

6.  Autophagy regulates spermatid differentiation via degradation of PDLIM1.

Authors:  Yongliang Shang; Hongna Wang; Pengfei Jia; Haichao Zhao; Chao Liu; Weixiao Liu; Zhenhua Song; Zhiliang Xu; Lin Yang; Yanfang Wang; Wei Li
Journal:  Autophagy       Date:  2016-06-16       Impact factor: 16.016

7.  Sperm-related phenotypes implicated in both maintenance and breakdown of a natural species barrier in the house mouse.

Authors:  Jana Albrechtová; Tomás Albrecht; Stuart J E Baird; Milos Macholán; Geir Rudolfsen; Pavel Munclinger; Priscilla K Tucker; Jaroslav Piálek
Journal:  Proc Biol Sci       Date:  2012-10-10       Impact factor: 5.349

8.  Novel insights into the downstream pathways and targets controlled by transcription factors CREM in the testis.

Authors:  Rok Kosir; Peter Juvan; Martina Perse; Tomaz Budefeld; Gregor Majdic; Martina Fink; Paolo Sassone-Corsi; Damjana Rozman
Journal:  PLoS One       Date:  2012-02-22       Impact factor: 3.240

Review 9.  Sperm Functional Genome Associated With Bull Fertility.

Authors:  Memmet Özbek; Mustafa Hitit; Abdullah Kaya; Frank Dean Jousan; Erdogan Memili
Journal:  Front Vet Sci       Date:  2021-06-22

10.  Expression analysis of MND1/GAJ, SPATA22, GAPDHS and ACR genes in testicular biopsies from non-obstructive azoospermia (NOA) patients.

Authors:  Andriy Dorosh; Olina Tepla; Eva Zatecka; Lukas Ded; Karel Koci; Jana Peknicova
Journal:  Reprod Biol Endocrinol       Date:  2013-05-15       Impact factor: 5.211

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