Literature DB >> 17911284

Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated from cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov.

Kae Kyoung Kwon1, Jung-Hee Woo1, Sung-Hyun Yang1, Ji-Hyun Kang1, Sung Gyun Kang1, Sang-Jin Kim1, Takako Sato2, Chiaki Kato2.   

Abstract

A novel marine bacterium, strain JCS350(T), was isolated from marine sediment samples collected from a cold-seep area. The 16S rRNA gene sequence of the isolate showed high similarity to that of Erythrobacter luteolus SW-109(T) (95.9 % sequence similarity). Lower 16S rRNA gene sequence similarities were shown to other members of the genus Erythrobacter (94.6-95.4 %) and members of the genus Porphyrobacter (94.5-95.2 %). Phylogenetic analysis with all members of the family Erythrobacteraceae and several members of the family Sphingomonadaceae revealed that the isolate formed a phyletic line with [Erythrobacter] luteolus that was distinct from other members of the family Erythrobacteraceae. The dominant fatty acids of strain JCS350(T) were 18 : 1omega7c, 16 : 1omega7c and cyclopropane 17 : 0. The major respiratory quinone was ubiquinone 10. The DNA G+C content was 54.5 mol%. The isolate did not contain bacteriochlorophyll a. Optimal growth required the presence of 2 % (w/v) NaCl with either 0.18 % CaCl(2) or 0.59 % MgCl(2), at pH 6.5 and at 35 degrees C. On the basis of the evidence of this polyphasic taxonomic study, strain JCS350(T) should be classified in a novel genus and species in the family Erythrobacteraceae, for which the name Altererythrobacter epoxidivorans gen. nov., sp. nov. is proposed. The misclassified species [Erythrobacter] luteolus is transferred to the new genus as Altererythrobacter luteolus comb. nov. The type strain of Altererythrobacter epoxidivorans is JCS350(T) (=KCCM 42314(T) =JCM 13815(T)) and the type strain of Altererythrobacter luteolus is SW-109(T) (=KCTC 12311(T) =JCM 12599(T)).

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Year:  2007        PMID: 17911284     DOI: 10.1099/ijs.0.64863-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  16 in total

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Journal:  J Microbiol       Date:  2013-08-30       Impact factor: 3.422

2.  Altererythrobacter estronivorus sp. nov., an Estrogen-Degrading Strain Isolated from Yundang Lagoon of Xiamen City in China.

Authors:  Dan Qin; Cong Ma; Anyi Hu; Fangfang Zhang; Hongbo Hu; Chang-Ping Yu
Journal:  Curr Microbiol       Date:  2016-02-08       Impact factor: 2.188

3.  Altererythrobacter flava sp. nov., a new member of the family Erythrobacteraceae, isolated from a surface seawater sample.

Authors:  Xiao-Mei Zhang; Dao-Feng Zhang; Yuan-Lan Zhang
Journal:  Antonie Van Leeuwenhoek       Date:  2021-03-04       Impact factor: 2.271

4.  Altererythrobacter segetis sp. nov., Isolated from Farmland Soil.

Authors:  Jae-Chan Lee; Kyung-Sook Whang
Journal:  Curr Microbiol       Date:  2020-11-30       Impact factor: 2.188

5.  First Evidence of Altererythrobacter sp. LY02 with Indirect Algicidal Activity on the Toxic Dinoflagellate, Alexandrium tamarense.

Authors:  Yi Li; Lei Liu; Yanting Xu; Chengwei Guan; Xueqian Lei; Wei Zheng; Hailei Wang; Tianling Zheng
Journal:  Curr Microbiol       Date:  2016-07-15       Impact factor: 2.188

6.  Erythrobacter nanhaiensis sp. nov., A Novel Member of the Genus Erythrobacter Isolated from the South China Sea.

Authors:  Xiao Chen; Jihua Liu; Yongle Xu; Yanan Wang; Xiaojun Yan
Journal:  Curr Microbiol       Date:  2018-10-20       Impact factor: 2.188

7.  Compositional profile of α / β-hydrolase fold proteins in mangrove soil metagenomes: prevalence of epoxide hydrolases and haloalkane dehalogenases in oil-contaminated sites.

Authors:  Diego Javier Jiménez; Francisco Dini-Andreote; Júlia Ronzella Ottoni; Valéria Maia de Oliveira; Jan Dirk van Elsas; Fernando Dini Andreote
Journal:  Microb Biotechnol       Date:  2014-08-29       Impact factor: 5.813

8.  Draft Genome Sequence of Altererythrobacter marensis DSM 21428T, Isolated from Seawater.

Authors:  Hong Cheng; Yue-Hong Wu; Ying-Yi Huo; Chun-Sheng Wang; Xue-Wei Xu
Journal:  Genome Announc       Date:  2016-02-04

9.  Porphyrobacter mercurialis sp. nov., isolated from a stadium seat and emended description of the genus Porphyrobacter.

Authors:  David A Coil; Jennifer C Flanagan; Andrew Stump; Alexandra Alexiev; Jenna M Lang; Jonathan A Eisen
Journal:  PeerJ       Date:  2015-11-12       Impact factor: 2.984

10.  Draft Genome Sequence of Altererythrobacter troitsensis JCM 17037, Isolated from the Sea Urchin Strongylocentrotus intermedius.

Authors:  Peng Zhou; Yue-Hong Wu; Hong Cheng; Chun-Sheng Wang; Xue-Wei Xu
Journal:  Genome Announc       Date:  2016-01-14
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