Literature DB >> 17909180

Chymotryptic specificity determinants in the 1.0 A structure of the zinc-inhibited human tissue kallikrein 7.

Mekdes Debela1, Petra Hess, Viktor Magdolen, Norman M Schechter, Thomas Steiner, Robert Huber, Wolfram Bode, Peter Goettig.   

Abstract

hK7 or human stratum corneum chymotryptic enzyme belongs to the human tissue kallikrein (hKs) serine proteinase family and is strongly expressed in the upper layers of the epidermis. It participates in skin desquamation but is also implicated in diverse skin diseases and is a potential biomarker of ovarian cancer. We have solved x-ray structures of recombinant active hK7 at medium and atomic resolution in the presence of the inhibitors succinyl-Ala-Ala-Pro-Phe-chloromethyl ketone and Ala-Ala-Phe-chloromethyl ketone. The most distinguishing features of hK7 are the short 70-80 loop and the unique S1 pocket, which prefers P1 Tyr residues, as shown by kinetic data. Similar to several other kallikreins, the enzyme activity is inhibited by Zn(2+) and Cu(2+) at low micromolar concentrations. Biochemical analyses of the mutants H99A and H41F confirm that only the metal-binding site at His(99) close to the catalytic triad accounts for the noncompetitive Zn(2+) inhibition type. Additionally, hK7 exhibits large positively charged surface patches, representing putative exosites for prime side substrate recognition.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17909180      PMCID: PMC2042166          DOI: 10.1073/pnas.0707811104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  The single calcium-binding site of crystallin bovin beta-trypsin.

Authors:  W Bode; P Schwager
Journal:  FEBS Lett       Date:  1975-08-01       Impact factor: 4.124

2.  Detection, delineation, measurement and display of cavities in macromolecular structures.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-03-01

3.  Rat submaxillary gland serine protease, tonin. Structure solution and refinement at 1.8 A resolution.

Authors:  M Fujinaga; M N James
Journal:  J Mol Biol       Date:  1987-05-20       Impact factor: 5.469

4.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

5.  Proteolytic degradation of desmosomes in plantar stratum corneum leads to cell dissociation in vitro.

Authors:  T Egelrud; P A Hofer; A Lundström
Journal:  Acta Derm Venereol       Date:  1988       Impact factor: 4.437

6.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

7.  Structural basis of the zinc inhibition of human tissue kallikrein 5.

Authors:  Mekdes Debela; Peter Goettig; Viktor Magdolen; Robert Huber; Norman M Schechter; Wolfram Bode
Journal:  J Mol Biol       Date:  2007-08-24       Impact factor: 5.469

8.  Transgenic mice over-expressing a serine protease in the skin: evidence of interferon gamma-independent MHC II expression by epidermal keratinocytes.

Authors:  Annelii Ny; Torbjörn Egelrud
Journal:  Acta Derm Venereol       Date:  2003       Impact factor: 4.437

9.  The refined 1.9-A X-ray crystal structure of D-Phe-Pro-Arg chloromethylketone-inhibited human alpha-thrombin: structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships.

Authors:  W Bode; D Turk; A Karshikov
Journal:  Protein Sci       Date:  1992-04       Impact factor: 6.725

10.  Prognostic value of quantitatively assessed KLK7 expression in ovarian cancer.

Authors:  Lianna G Kyriakopoulou; George M Yousef; Andreas Scorilas; Dionyssios Katsaros; Marco Massobrio; Stefano Fracchioli; Eleftherios P Diamandis
Journal:  Clin Biochem       Date:  2003-03       Impact factor: 3.281

View more
  17 in total

Review 1.  Kallikreins - The melting pot of activity and function.

Authors:  Magdalena Kalinska; Ulf Meyer-Hoffert; Tomasz Kantyka; Jan Potempa
Journal:  Biochimie       Date:  2015-09-25       Impact factor: 4.079

Review 2.  Involvement of corneodesmosome degradation and lamellar granule transportation in the desquamation process.

Authors:  Akemi Ishida-Yamamoto; Mari Kishibe
Journal:  Med Mol Morphol       Date:  2011-03-23       Impact factor: 2.309

3.  Spontaneous proton transfer to a conserved intein residue determines on-pathway protein splicing.

Authors:  Brian Pereira; Philip T Shemella; Gil Amitai; Georges Belfort; Saroj K Nayak; Marlene Belfort
Journal:  J Mol Biol       Date:  2010-12-23       Impact factor: 5.469

Review 4.  Unleashing the therapeutic potential of human kallikrein-related serine proteases.

Authors:  Ioannis Prassas; Azza Eissa; Gennadiy Poda; Eleftherios P Diamandis
Journal:  Nat Rev Drug Discov       Date:  2015-02-20       Impact factor: 84.694

5.  Novel Biological Substrates of Human Kallikrein 7 Identified through Degradomics.

Authors:  Yijing Yu; Ioannis Prassas; Apostolos Dimitromanolakis; Eleftherios P Diamandis
Journal:  J Biol Chem       Date:  2015-06-01       Impact factor: 5.157

Review 6.  Natural and synthetic inhibitors of kallikrein-related peptidases (KLKs).

Authors:  Peter Goettig; Viktor Magdolen; Hans Brandstetter
Journal:  Biochimie       Date:  2010-07-06       Impact factor: 4.079

7.  Structure-function analyses of human kallikrein-related peptidase 2 establish the 99-loop as master regulator of activity.

Authors:  Wolfgang Skala; Daniel T Utzschneider; Viktor Magdolen; Mekdes Debela; Shihui Guo; Charles S Craik; Hans Brandstetter; Peter Goettig
Journal:  J Biol Chem       Date:  2014-10-16       Impact factor: 5.157

8.  Direct and indirect mechanisms of KLK4 inhibition revealed by structure and dynamics.

Authors:  Blake T Riley; Olga Ilyichova; Mauricio G S Costa; Benjamin T Porebski; Simon J de Veer; Joakim E Swedberg; Itamar Kass; Jonathan M Harris; David E Hoke; Ashley M Buckle
Journal:  Sci Rep       Date:  2016-10-21       Impact factor: 4.379

9.  The substrate degradome of meprin metalloproteases reveals an unexpected proteolytic link between meprin β and ADAM10.

Authors:  Tamara Jefferson; Ulrich Auf dem Keller; Caroline Bellac; Verena V Metz; Claudia Broder; Jana Hedrich; Anke Ohler; Wladislaw Maier; Viktor Magdolen; Erwin Sterchi; Judith S Bond; Arumugam Jayakumar; Heiko Traupe; Athena Chalaris; Stefan Rose-John; Claus U Pietrzik; Rolf Postina; Christopher M Overall; Christoph Becker-Pauly
Journal:  Cell Mol Life Sci       Date:  2012-09-01       Impact factor: 9.261

10.  Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.

Authors:  Mi Li; Jaroslav Srp; Michael Mareš; Alexander Wlodawer; Alla Gustchina
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-07-29       Impact factor: 5.699

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.