Literature DB >> 17900388

An improved holey carbon film for cryo-electron microscopy.

Joel Quispe1, John Damiano, Stephen E Mick, David P Nackashi, Denis Fellmann, Teddy G Ajero, Bridget Carragher, Clinton S Potter.   

Abstract

Two issues that often impact the cryo-electron microscopy (cryoEM) specimen preparation process are agglomeration of particles near hole edges in holey carbon films and variations in vitreous ice thickness. In many cases, the source of these issues was identified to be the residues and topography often seen in commercially available films. To study and minimize their impact during specimen preparation, an improved holey carbon film has been developed. Rather than using a consumable template based on soft materials that must be removed prior to grid assembly, a method was developed that uses a hard template and a water-soluble release layer to replicate the template pattern into the carbon films. The advantages of this method are the improved purity and flatness of the carbon films, and these attributes are shown to have a dramatic improvement on the distribution of single particles embedded in vitreous ice suspended across the holes. Improving particle distribution is an enabling factor toward increasing the throughput of data collection for cryoEM.

Entities:  

Year:  2007        PMID: 17900388     DOI: 10.1017/S1431927607070791

Source DB:  PubMed          Journal:  Microsc Microanal        ISSN: 1431-9276            Impact factor:   4.127


  24 in total

Review 1.  Automated data collection in single particle electron microscopy.

Authors:  Yong Zi Tan; Anchi Cheng; Clinton S Potter; Bridget Carragher
Journal:  Microscopy (Oxf)       Date:  2015-12-15       Impact factor: 1.571

2.  Routine single particle CryoEM sample and grid characterization by tomography.

Authors:  Venkata P Dandey; Hui Wei; Alex J Noble; Julia Brasch; Jillian Chase; Priyamvada Acharya; Yong Zi Tan; Zhening Zhang; Laura Y Kim; Giovanna Scapin; Micah Rapp; Edward T Eng; William J Rice; Anchi Cheng; Carl J Negro; Lawrence Shapiro; Peter D Kwong; David Jeruzalmi; Amedee des Georges; Clinton S Potter; Bridget Carragher
Journal:  Elife       Date:  2018-05-29       Impact factor: 8.140

3.  Simultaneous determination of sample thickness, tilt, and electron mean free path using tomographic tilt images based on Beer-Lambert law.

Authors:  Rui Yan; Thomas J Edwards; Logan M Pankratz; Richard J Kuhn; Jason K Lanman; Jun Liu; Wen Jiang
Journal:  J Struct Biol       Date:  2015-10-09       Impact factor: 2.867

4.  Block Liposome and Nanotube Formation is a General Phenomenon of Two-Component Membranes Containing Multivalent Lipids.

Authors:  Alexandra Zidovska; Kai K Ewert; Joel Quispe; Bridget Carragher; Clinton S Potter; Cyrus R Safinya
Journal:  Soft Matter       Date:  2011-06-20       Impact factor: 3.679

Review 5.  Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy.

Authors:  Nikolaus Grigorieff; Stephen C Harrison
Journal:  Curr Opin Struct Biol       Date:  2011-02-18       Impact factor: 6.809

6.  Block liposomes from curvature-stabilizing lipids: connected nanotubes, -rods, or -spheres.

Authors:  Alexandra Zidovska; Kai K Ewert; Joel Quispe; Bridget Carragher; Clinton S Potter; Cyrus R Safinya
Journal:  Langmuir       Date:  2009-03-03       Impact factor: 3.882

7.  Liquid crystalline phases of dendritic lipid-DNA self-assemblies: lamellar, hexagonal, and DNA bundles.

Authors:  Alexandra Zidovska; Heather M Evans; Kai K Ewert; Joel Quispe; Bridget Carragher; Clinton S Potter; Cyrus R Safinya
Journal:  J Phys Chem B       Date:  2009-03-26       Impact factor: 2.991

8.  A new method for vitrifying samples for cryoEM.

Authors:  Ivan Razinkov; Venkat Dandey; Hui Wei; Zhening Zhang; David Melnekoff; William J Rice; Christoph Wigge; Clinton S Potter; Bridget Carragher
Journal:  J Struct Biol       Date:  2016-06-08       Impact factor: 2.867

9.  Block liposomes vesicles of charged lipids with distinctly shaped nanoscale sphere-, pear-, tube-, or rod-segments.

Authors:  Alexandra Zidovska; Kai K Ewert; Joel Quispe; Bridget Carragher; Clinton S Potter; Cyrus R Safinya
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

10.  Microtubule nucleating gamma-TuSC assembles structures with 13-fold microtubule-like symmetry.

Authors:  Justin M Kollman; Jessica K Polka; Alex Zelter; Trisha N Davis; David A Agard
Journal:  Nature       Date:  2010-07-14       Impact factor: 49.962

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