Literature DB >> 1789449

Three DNA sequencing methods using capillary gel electrophoresis and laser-induced fluorescence.

H Swerdlow1, J Z Zhang, D Y Chen, H R Harke, R Grey, S L Wu, N J Dovichi, C Fuller.   

Abstract

Capillary gel electrophoresis is demonstrated for the four-spectral-channel sequencing technique of Smith, the two-spectral-channel sequencing technique of Prober, and the one-spectral-channel sequencing technique of Richardson and Tabor. Sequencing rates up to 1000 bases/h are obtained at electric field strengths of 465 V/cm. At lower electric field strengths, capillary electrophoresis produces useful data for fragments greater than 550 nucleotides in length with 2 times better resolution than slab gel electrophoresis. An on-column detector produces detection limits of 200 zmol (1 zmol = 10(-21) mol = 600 molecules) for the four-spectral-channel technique. A postcolumn detector, based on the sheath flow cuvette, produces detection limits of 20 and 2 zmol for the two- and one-spectral-channel techniques, respectively.

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Year:  1991        PMID: 1789449     DOI: 10.1021/ac00024a006

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  12 in total

1.  Efficient incorporation of positively charged 2', 3'-dideoxynucleoside-5'-triphosphates by DNA polymerases and their application in 'direct-load' DNA sequencing.

Authors:  Patrick J Finn; Matthew G Bull; Haiguang Xiao; Paula D Phillips; John R Nelson; Greg Grossmann; Satyam Nampalli; Bernard F McArdle; J Anthony Mamone; Parke K Flick; Carl W Fuller; Shiv Kumar
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

2.  Fidelity of select restriction endonucleases in determining microbial diversity by terminal-restriction fragment length polymorphism.

Authors:  Jeff J Engebretson; Craig L Moyer
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

3.  Capillary electrophoresis coupled with automated fraction collection.

Authors:  Bonnie Jaskowski Huge; Ryan J Flaherty; Oluwatosin O Dada; Norman J Dovichi
Journal:  Talanta       Date:  2014-07-15       Impact factor: 6.057

4.  Simplified sheath flow cuvette design for ultrasensitive laser induced fluorescence detection in capillary electrophoresis.

Authors:  Oluwatosin O Dada; Bonnie J Huge; Norman J Dovichi
Journal:  Analyst       Date:  2012-05-18       Impact factor: 4.616

5.  Constant denaturant capillary electrophoresis (CDCE): a high resolution approach to mutational analysis.

Authors:  K Khrapko; J S Hanekamp; W G Thilly; A Belenkii; F Foret; B L Karger
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

6.  CE-MALDI interface based on inkjet technology.

Authors:  Michael W Vannatta; Colin D Whitmore; Norman J Dovichi
Journal:  Electrophoresis       Date:  2009-12       Impact factor: 3.535

7.  New fluorescent labels for time-resolved detection of biomolecules.

Authors:  M Sauer; K T Han; R Müller; A Schulz; R Tadday; S Seeger; J Wolfrum; J Arden-Jacob; G Deltau; N J Marx; K H Drexhage
Journal:  J Fluoresc       Date:  1993-09       Impact factor: 2.217

8.  Two-label peak-height encoded DNA sequencing by capillary gel electrophoresis: three examples.

Authors:  D Chen; H R Harke; N J Dovichi
Journal:  Nucleic Acids Res       Date:  1992-09-25       Impact factor: 16.971

9.  Internal fluorescence labeling with fluorescent deoxynucleotides in two-label peak-height encoded DNA sequencing by capillary electrophoresis.

Authors:  H R Starke; J Y Yan; J Z Zhang; K Mühlegger; K Effgen; N J Dovichi
Journal:  Nucleic Acids Res       Date:  1994-09-25       Impact factor: 16.971

10.  Synthesis and application of charge-modified dye-labeled dideoxynucleoside-5'-triphosphates to 'direct-load' DNA sequencing.

Authors:  Patrick J Finn; Lei Sun; Satyam Nampalli; Haiguang Xiao; John R Nelson; J Anthony Mamone; Greg Grossmann; Parke K Flick; Carl W Fuller; Shiv Kumar
Journal:  Nucleic Acids Res       Date:  2002-07-01       Impact factor: 16.971

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