Literature DB >> 17878321

Nucleotide synthetase ribozymes may have emerged first in the RNA world.

Wentao Ma1, Chunwu Yu, Wentao Zhang, Jiming Hu.   

Abstract

Though the "RNA world" hypothesis has gained a central role in ideas concerning the origin of life, the scenario concerning its emergence remains uncertain. It has been speculated that the first scene may have been the emergence of a template-dependent RNA synthetase ribozyme, which catalyzed its own replication: thus, "RNA replicase." However, the speculation remains uncertain, primarily because of the large sequence length requirement of such a replicase and the lack of a convincing mechanism to ensure its self-favoring features. Instead, we propose a nucleotide synthetase ribozyme as an alternative candidate, especially considering recent experimental evidence suggesting the possibility of effective nonenzymatic template-directed synthesis of RNA. A computer simulation was conducted to support our proposal. The conditions for the emergence of the nucleotide synthetase ribozyme are discussed, based on dynamic analysis on a computer. We suggest the template-dependent RNA synthetase ribozyme emerged later, perhaps after the emergence of protocells.

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Year:  2007        PMID: 17878321      PMCID: PMC2040096          DOI: 10.1261/rna.658507

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  29 in total

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8.  Montmorillonite catalysis of 30-50 mer oligonucleotides: laboratory demonstration of potential steps in the origin of the RNA world.

Authors:  James P Ferris
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  19 in total

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5.  Universal sequence replication, reversible polymerization and early functional biopolymers: a model for the initiation of prebiotic sequence evolution.

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Journal:  PLoS One       Date:  2012-04-06       Impact factor: 3.240

6.  The scenario on the origin of translation in the RNA world: in principle of replication parsimony.

Authors:  Wentao Ma
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7.  The evolution of enzyme specificity in the metabolic replicator model of prebiotic evolution.

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Journal:  PLoS One       Date:  2011-06-16       Impact factor: 3.240

8.  Computer simulation on the cooperation of functional molecules during the early stages of evolution.

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9.  Prebiotic replicase evolution in a surface-bound metabolic system: parasites as a source of adaptive evolution.

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10.  The emergence of DNA in the RNA world: an in silico simulation study of genetic takeover.

Authors:  Wentao Ma; Chunwu Yu; Wentao Zhang; Sanmao Wu; Yu Feng
Journal:  BMC Evol Biol       Date:  2015-12-07       Impact factor: 3.260

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