Literature DB >> 17877384

Structural properties of ionic detergent aggregates: a large-scale molecular dynamics study of sodium dodecyl sulfate.

Maria Sammalkorpi1, Mikko Karttunen, Mikko Haataja.   

Abstract

The properties of sodium dodecyl sulfate (SDS) aggregates were studied through extensive molecular dynamics simulations with explicit solvent. First, we provide a parametrization of the model within Gromacs. Then, we probe the kinetics of aggregation by starting from a random solution of SDS molecules and letting the system explore its kinetic pathway during the aggregation of multiple units. We observe a structural transition for the surfactant aggregates brought upon by a change in temperature. Specifically, at low temperatures, the surfactants form crystalline aggregates, whereas at elevated temperatures, they form micelles. We also investigate the dependence of aggregation kinetics on surfactant concentration and report on the molecular level structural changes involved in the transition.

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Year:  2007        PMID: 17877384     DOI: 10.1021/jp072587a

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  17 in total

1.  Modeling Protein-Micelle Systems in Implicit Water.

Authors:  Rodney E Versace; Themis Lazaridis
Journal:  J Phys Chem B       Date:  2015-06-15       Impact factor: 2.991

2.  Characterization of a disordered protein during micellation: interactions of α-synuclein with sodium dodecyl sulfate.

Authors:  Jianhui Tian; Anurag Sethi; Divina Anunciado; Dung M Vu; S Gnanakaran
Journal:  J Phys Chem B       Date:  2012-04-06       Impact factor: 2.991

3.  Experimental and molecular dynamics investigation into the amphiphilic nature of sulforhodamine B.

Authors:  Baris E Polat; Shangchao Lin; Jonathan D Mendenhall; Brett VanVeller; Robert Langer; Daniel Blankschtein
Journal:  J Phys Chem B       Date:  2011-01-11       Impact factor: 2.991

4.  Structure and dynamics of cholic acid and dodecylphosphocholine-cholic acid aggregates.

Authors:  Abdallah Sayyed-Ahmad; Lenard M Lichtenberger; Alemayehu A Gorfe
Journal:  Langmuir       Date:  2010-08-17       Impact factor: 3.882

5.  THE ROLE OF THE ASYMMETRIC BOLAAMPHIPHILIC CHARACTER OF VECAR ON THE KINETIC AND STRUCTURAL ASPECTS OF ITS SELF-ASSEMBLY: A MOLECULAR DYNAMICS SIMULATION STUDY.

Authors:  Hye-Young Kim; Brian R Novak; Bijay Shrestha; S Emma Lee; Dorel Moldovan
Journal:  Colloids Surf A Physicochem Eng Asp       Date:  2017-03-30       Impact factor: 4.539

6.  Predicting Partition Coefficients of Neutral and Charged Solutes in the Mixed SLES-Fatty Acid Micellar System.

Authors:  Mattia Turchi; Abhishek A Kognole; Anmol Kumar; Qiong Cai; Guoping Lian; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2020-02-25       Impact factor: 2.991

7.  Multiscale molecular dynamics simulations of sodium dodecyl sulfate micelles: from coarse-grained to all-atom resolution.

Authors:  Guillaume Roussel; Catherine Michaux; Eric A Perpète
Journal:  J Mol Model       Date:  2014-10-10       Impact factor: 1.810

8.  Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly.

Authors:  David Winogradoff; Shalini John; Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2020-02-21       Impact factor: 7.790

9.  Insight into α-synuclein plasticity and misfolding from differential micelle binding.

Authors:  Parichita Mazumder; Jae-Eun Suk; Tobias S Ulmer
Journal:  J Phys Chem B       Date:  2013-09-12       Impact factor: 2.991

10.  Critical structural and functional roles for the N-terminal insertion sequence in surfactant protein B analogs.

Authors:  Frans J Walther; Alan J Waring; Jose M Hernandez-Juviel; Larry M Gordon; Zhengdong Wang; Chun-Ling Jung; Piotr Ruchala; Andrew P Clark; Wesley M Smith; Shantanu Sharma; Robert H Notter
Journal:  PLoS One       Date:  2010-01-13       Impact factor: 3.240

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