Literature DB >> 17876307

Biomarker method validation in anticancer drug development.

J Cummings1, T H Ward, A Greystoke, M Ranson, C Dive.   

Abstract

Over recent years the role of biomarkers in anticancer drug development has expanded across a spectrum of applications ranging from research tool during early discovery to surrogate endpoint in the clinic. However, in Europe when biomarker measurements are performed on samples collected from subjects entered into clinical trials of new investigational agents, laboratories conducting these analyses become subject to the Clinical Trials Regulations. While these regulations are not specific in their requirements of research laboratories, quality assurance and in particular assay validation are essential. This review, therefore, focuses on a discussion of current thinking in biomarker assay validation. Five categories define the majority of biomarker assays from 'absolute quantitation' to 'categorical'. Validation must therefore take account of both the position of the biomarker in the spectrum towards clinical end point and the level of quantitation inherent in the methodology. Biomarker assay validation should be performed ideally in stages on 'a fit for purpose' basis avoiding unnecessarily dogmatic adherence to rigid guidelines but with careful monitoring of progress at the end of each stage. These principles are illustrated with two specific examples: (a) absolute quantitation of protein biomarkers by mass spectrometry and (b) the M30 and M65 ELISA assays as surrogate end points of cell death.

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Year:  2007        PMID: 17876307      PMCID: PMC2259203          DOI: 10.1038/sj.bjp.0707441

Source DB:  PubMed          Journal:  Br J Pharmacol        ISSN: 0007-1188            Impact factor:   8.739


  94 in total

1.  Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS.

Authors:  Scott A Gerber; John Rush; Olaf Stemman; Marc W Kirschner; Steven P Gygi
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-27       Impact factor: 11.205

2.  Comprehensive validation of a real-time quantitative bcr-abl assay for clinical laboratory use.

Authors:  Carol D Jones; Cecilia Yeung; James L Zehnder
Journal:  Am J Clin Pathol       Date:  2003-07       Impact factor: 2.493

Review 3.  A review of quantitative methods for proteomic studies.

Authors:  Catherine Fenselau
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2006-12-11       Impact factor: 3.205

4.  Biomarker qualification pilot process at the US Food and Drug Administration.

Authors:  Federico Goodsaid; Felix Frueh
Journal:  AAPS J       Date:  2007-03-23       Impact factor: 4.009

5.  Procedural elements involved in maintaining bioanalytical data integrity for good laboratory practices studies and regulated clinical studies.

Authors:  Christopher A James; Howard M Hill
Journal:  AAPS J       Date:  2007-04-27       Impact factor: 4.009

6.  Best practices during bioanalytical method validation for the characterization of assay reagents and the evaluation of analyte stability in assay standards, quality controls, and study samples.

Authors:  William Nowatzke; Eric Woolf
Journal:  AAPS J       Date:  2007-04-20       Impact factor: 4.009

7.  Qualification of M30 and M65 ELISAs as surrogate biomarkers of cell death: long term antigen stability in cancer patient plasma.

Authors:  J Cummings; M Ranson; F Butt; D Moore; C Dive
Journal:  Cancer Chemother Pharmacol       Date:  2007-02-27       Impact factor: 3.333

8.  Simultaneous detection of apoptosis and proliferation in colorectal carcinoma by multiparameter flow cytometry allows separation of high and low-turnover tumors with distinct clinical outcome.

Authors:  J Dennis Rupa; Adriaan P de Bruïne; Andrea J Gerbers; Mathie P G Leers; Marius Nap; Alfons G H Kessels; Bert Schutte; Jan Willem Arends
Journal:  Cancer       Date:  2003-05-15       Impact factor: 6.860

9.  A novel assay for discovery and characterization of pro-apoptotic drugs and for monitoring apoptosis in patient sera.

Authors:  K Bivén; H Erdal; M Hägg; T Ueno; R Zhou; M Lynch; B Rowley; J Wood; C Zhang; M Toi; M C Shoshan; S Linder
Journal:  Apoptosis       Date:  2003-06       Impact factor: 4.677

Review 10.  New cancer biomarkers deriving from NCI early detection research.

Authors:  Mukesh Verma; Sudhir Srivastava
Journal:  Recent Results Cancer Res       Date:  2003
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  34 in total

1.  S-glutathionylated serine proteinase inhibitors as plasma biomarkers in assessing response to redox-modulating drugs.

Authors:  Christina L Grek; Danyelle M Townsend; Joachim D Uys; Yefim Manevich; Woodrow J Coker; Christopher J Pazoles; Kenneth D Tew
Journal:  Cancer Res       Date:  2012-03-08       Impact factor: 12.701

2.  Validation Protocol: First Step of a Lean-Total Quality Management Principle in a New Laboratory Set-up in a Tertiary Care Hospital in India.

Authors:  Barnali Das
Journal:  Indian J Clin Biochem       Date:  2011-02-18

3.  An approach to the validation of flow cytometry methods.

Authors:  Jo Cunliffe; Nicola Derbyshire; Sue Keeler; Ruth Coldwell
Journal:  Pharm Res       Date:  2009-10-14       Impact factor: 4.200

4.  The M30 assay does not detect apoptosis in epithelial-derived cancer cells expressing low levels of cytokeratin 18.

Authors:  Buse Cevatemre; Engin Ulukaya; Mehmet Sarimahmut; Arzu Yilmaztepe Oral; Fiona M Frame
Journal:  Tumour Biol       Date:  2015-04-07

5.  Clinical evaluation of M30 and M65 ELISA cell death assays as circulating biomarkers in a drug-sensitive tumor, testicular cancer.

Authors:  Esther C de Haas; Alessandra di Pietro; Kathryn L Simpson; Coby Meijer; Albert J H Suurmeijer; Lee J Lancashire; J Cummings; Steven de Jong; Elisabeth G E de Vries; Caroline Dive; Jourik A Gietema
Journal:  Neoplasia       Date:  2008-10       Impact factor: 5.715

Review 6.  Validation of analytic methods for biomarkers used in drug development.

Authors:  Cindy H Chau; Olivier Rixe; Howard McLeod; William D Figg
Journal:  Clin Cancer Res       Date:  2008-10-01       Impact factor: 12.531

Review 7.  Fit-for-purpose biomarker method validation for application in clinical trials of anticancer drugs.

Authors:  J Cummings; F Raynaud; L Jones; R Sugar; C Dive
Journal:  Br J Cancer       Date:  2010-10-05       Impact factor: 7.640

8.  Identification of a novel topoisomerase inhibitor effective in cells overexpressing drug efflux transporters.

Authors:  Walid Fayad; Mårten Fryknäs; Slavica Brnjic; Maria Hägg Olofsson; Rolf Larsson; Stig Linder
Journal:  PLoS One       Date:  2009-10-02       Impact factor: 3.240

9.  Discovery of gene expression-based pharmacodynamic biomarker for a p53 context-specific anti-tumor drug Wee1 inhibitor.

Authors:  Shinji Mizuarai; Kazunori Yamanaka; Hiraku Itadani; Tsuyoshi Arai; Toshihide Nishibata; Hiroshi Hirai; Hidehito Kotani
Journal:  Mol Cancer       Date:  2009-06-08       Impact factor: 27.401

10.  Considerations for the use of plasma cytokeratin 18 as a biomarker in pancreatic cancer.

Authors:  C Dive; R A Smith; E Garner; T Ward; S St George-Smith; F Campbell; W Greenhalf; P Ghaneh; J P Neoptolemos
Journal:  Br J Cancer       Date:  2010-01-05       Impact factor: 7.640

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