Literature DB >> 17875925

In vivo analysis of developmentally and evolutionarily dynamic protein-DNA interactions regulating transcription of the Pgk2 gene during mammalian spermatogenesis.

Hirotaka Yoshioka1, Christopher B Geyer, Jacey L Hornecker, Krishan T Patel, John R McCarrey.   

Abstract

Transcription of the testis-specific Pgk2 gene is selectively activated in primary spermatocytes to provide a source of phosphoglycerate kinase that is critical to normal motility and fertility of mammalian spermatozoa. We examined dynamic changes in protein-DNA interactions at the Pgk2 gene promoter during murine spermatogenesis in vivo by performing genomic footprinting and chromatin immunoprecipitation assays with enriched populations of murine spermatogenic cells at stages prior to, during, and following transcription of this gene. We found that genes encoding the testis-specific homeodomain factor PBX4 and its coactivator, PREP1, are expressed in patterns that mirror expression of the Pgk2 gene and that these factors become bound to the Pgk2 enhancer in cells in which this gene is actively expressed. We therefore suggest that these factors, along with CREM and SP3, direct stage- and cell type-specific transcription of the Pgk2 gene during spermatogenesis. We propose that binding of PBX4, plus its coactivator PREP1, is a rate-limiting step leading to the initiation of tissue-specific transcription of the Pgk2 gene. This study provides insight into the developmentally dynamic establishment of tissue-specific protein-DNA interactions in vivo. It also allows us to speculate about the events that led to tissue-specific regulation of the Pgk2 gene during mammalian evolution.

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Year:  2007        PMID: 17875925      PMCID: PMC2169153          DOI: 10.1128/MCB.00990-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

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2.  Chromatin immunoprecipitation (ChIP) on chip experiments uncover a widespread distribution of NF-Y binding CCAAT sites outside of core promoters.

Authors:  Anna Testa; Giacomo Donati; Pearlly Yan; Francesca Romani; Tim H-M Huang; M Alessandra Viganò; Roberto Mantovani
Journal:  J Biol Chem       Date:  2005-01-11       Impact factor: 5.157

Review 3.  Spermatogenesis as a model system for developmental analysis of regulatory mechanisms associated with tissue-specific gene expression.

Authors:  J R McCarrey
Journal:  Semin Cell Dev Biol       Date:  1998-08       Impact factor: 7.727

4.  Differentiation-dependent alterations in histone methylation and chromatin architecture at the inducible chicken lysozyme gene.

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Journal:  J Biol Chem       Date:  2005-05-27       Impact factor: 5.157

5.  Purification, culture, and fractionation of spermatogenic cells.

Authors:  A R Bellvé
Journal:  Methods Enzymol       Date:  1993       Impact factor: 1.600

6.  The PBX-regulating protein PREP1 is present in different PBX-complexed forms in mouse.

Authors:  E Ferretti; H Schulz; D Talarico; F Blasi; J Berthelsen
Journal:  Mech Dev       Date:  1999-05       Impact factor: 1.882

7.  A conserved motif N-terminal to the DNA-binding domains of myogenic bHLH transcription factors mediates cooperative DNA binding with pbx-Meis1/Prep1.

Authors:  P S Knoepfler; D A Bergstrom; T Uetsuki; I Dac-Korytko; Y H Sun; W E Wright; S J Tapscott; M P Kamps
Journal:  Nucleic Acids Res       Date:  1999-09-15       Impact factor: 16.971

8.  Identification, characterization, and functional analysis of sp1 transcript variants expressed in germ cells during mouse spermatogenesis.

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Journal:  Biol Reprod       Date:  2004-12-15       Impact factor: 4.285

9.  MyoD targets chromatin remodeling complexes to the myogenin locus prior to forming a stable DNA-bound complex.

Authors:  Ivana L de la Serna; Yasuyuki Ohkawa; Charlotte A Berkes; Donald A Bergstrom; Caroline S Dacwag; Stephen J Tapscott; Anthony N Imbalzano
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10.  Genome-wide analysis of cAMP-response element binding protein occupancy, phosphorylation, and target gene activation in human tissues.

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-07       Impact factor: 11.205

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  17 in total

1.  Microarray-based analysis of cell-cycle gene expression during spermatogenesis in the mouse.

Authors:  Dipanwita Roy Choudhury; Chris Small; Yufeng Wang; Paul R Mueller; Vivienne I Rebel; Michael D Griswold; John R McCarrey
Journal:  Biol Reprod       Date:  2010-07-14       Impact factor: 4.285

2.  Dephosphorylation of Tak1 at Ser412 greatly contributes to the spermatocyte-specific testis toxicity induced by (5R)-5-hydroxytriptolide in C57BL/6 mice.

Authors:  Xinming Qi; Chunzhu Li; Chunyong Wu; Cunzhi Yu; Mingxia Liu; Man Gao; Chenggang Li; Hong Yan; Jin Ren
Journal:  Toxicol Res (Camb)       Date:  2016-01-07       Impact factor: 3.524

3.  Sequence-specific promoter elements regulate temporal-specific changes in chromatin required for testis-specific activation of the Pgk2 gene.

Authors:  Zhangsheng Yang; Hirotaka Yoshioka; John R McCarrey
Journal:  Reproduction       Date:  2013-10-04       Impact factor: 3.906

4.  MYBBP1A: a new Ipr1's binding protein in mice.

Authors:  Lei Cai; Hui Pan; Krzysztof Trzciński; Claudette M Thompson; Qiang Wu; Igor Kramnik
Journal:  Mol Biol Rep       Date:  2010-03-11       Impact factor: 2.316

5.  A-MYB (MYBL1) stimulates murine testis-specific Ldhc expression via the cAMP-responsive element (CRE) site.

Authors:  Huanghui Tang; Erwin Goldberg
Journal:  Biol Reprod       Date:  2012-02-09       Impact factor: 4.285

6.  Activation and repression domains within the promoter of the rat cathepsin L gene orchestrate sertoli cell-specific and stage-specific gene transcription in transgenic mice.

Authors:  Thomas Visone; Martin Charron; William W Wright
Journal:  Biol Reprod       Date:  2009-05-20       Impact factor: 4.285

7.  Phosphoglycerate kinase 2 (PGK2) is essential for sperm function and male fertility in mice.

Authors:  Polina V Danshina; Christopher B Geyer; Qunsheng Dai; Eugenia H Goulding; William D Willis; G Barrie Kitto; John R McCarrey; E M Eddy; Deborah A O'Brien
Journal:  Biol Reprod       Date:  2009-09-16       Impact factor: 4.285

8.  Expression patterns of SP1 and SP3 during mouse spermatogenesis: SP1 down-regulation correlates with two successive promoter changes and translationally compromised transcripts.

Authors:  Wenli Ma; Gary C Horvath; Malathi K Kistler; W Stephen Kistler
Journal:  Biol Reprod       Date:  2008-04-16       Impact factor: 4.285

Review 9.  RNA-based gene duplication: mechanistic and evolutionary insights.

Authors:  Henrik Kaessmann; Nicolas Vinckenbosch; Manyuan Long
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

10.  Identification and characterization of a novel testis-specific gene CKT2, which encodes a substrate for protein kinase CK2.

Authors:  Xiyuan Bai; Derek Silvius; Edward D Chan; Denise Escalier; Shaun Xin Xu
Journal:  Nucleic Acids Res       Date:  2009-03-09       Impact factor: 16.971

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