Literature DB >> 17851443

Determination of the three-dimensional structure of Gynoside A in solution using NMR and molecular modeling.

Qian Li1, Zhi-Hong Yao, Yan-Hong Shi, Xin-Sheng Yao, Wen-Cai Ye, Xin Liu.   

Abstract

The three-dimensional structure of Gynoside A, an ocotillone-type triterpenoid glycoside isolated from Gynostemma pentaphyllum, was determined in pyridine-d5 and DMSO-d6 solution through constrained molecular modeling using constraints derived from proton NMR spectra. The calculation yielded well-defined global minima. Except for some quantitative details the overall structure of Gynoside A in pyridine-d5 shared many common features with that in DMSO-d6. The structure in pyridine-d5 had lower energies than that in DMSO-d6 solution.

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Year:  2007        PMID: 17851443      PMCID: PMC6149387          DOI: 10.3390/12040907

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  8 in total

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Authors:  L Lins; R Brasseur; W J Malaisse; M Biesemans; P Verheyden; R Willem
Journal:  Biochem Pharmacol       Date:  1996-10-25       Impact factor: 5.858

Review 2.  The bioactivity of saponins: triterpenoid and steroidal glycosides.

Authors:  A V Rao; D M Gurfinkel
Journal:  Drug Metabol Drug Interact       Date:  2000

3.  Pseudo-structures for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton-proton distance constraints with nuclear magnetic resonance.

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4.  Binding affinity difference induced by the stereochemistry of the sulfoxide bridge of the cyclic peptide inhibitors of Grb2-SH2 domain: NMR studies for the structural origin.

Authors:  Yan-hong Shi; Yan-Li Song; Dong-hai Lin; Jinzhi Tan; Peter P Roller; Qian Li; Ya-Qiu Long; Guo-Qiang Song
Journal:  Biochem Biophys Res Commun       Date:  2005-05-20       Impact factor: 3.575

5.  The inhibitory effect of triterpenoid glycosides originating from Sanguisorba officinalis on tissue factor activity and the production of TNF-alpha.

Authors:  Jae Youl Cho; Eun Sook Yoo; Bae Cheon Cha; Hwa-Jin Park; Man Hee Rhee; Yong Nam Han
Journal:  Planta Med       Date:  2006-10-04       Impact factor: 3.352

6.  Five new Ocotillone-type saponins from Gynostemma pentaphyllum.

Authors:  Xin Liu; Wencai Ye; Ziyao Mo; Biao Yu; Shouxun Zhao; Houming Wu; Chuntao Che; Renwang Jiang; Thomas C W Mak; W L Wendy Hsiao
Journal:  J Nat Prod       Date:  2004-07       Impact factor: 4.050

7.  Determination of the three-dimensional, solution-phase structure of the macrolide antibiotic oxolide in CD2Cl2 and D2O from NMR constraints.

Authors:  Wayne E Steinmetz; Andrew Sparrow; Ma Somsouk
Journal:  Magn Reson Chem       Date:  2005-01       Impact factor: 2.447

8.  Structure-activity studies of some oleanane triterpenoid glycosides and their related compounds from the leaves of Tetrapanax papyriferum on anti-inflammatory activities.

Authors:  E Sugishita; S Amagaya; Y Ogihara
Journal:  J Pharmacobiodyn       Date:  1982-06
  8 in total

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