Literature DB >> 17848776

Weighted graph cuts without eigenvectors a multilevel approach.

Inderjit S Dhillon1, Yuqiang Guan, Brian Kulis.   

Abstract

A variety of clustering algorithms have recently been proposed to handle data that is not linearly separable; spectral clustering and kernel k-means are two of the main methods. In this paper, we discuss an equivalence between the objective functions used in these seemingly different methods--in particular, a general weighted kernel k-means objective is mathematically equivalent to a weighted graph clustering objective. We exploit this equivalence to develop a fast, high-quality multilevel algorithm that directly optimizes various weighted graph clustering objectives, such as the popular ratio cut, normalized cut, and ratio association criteria. This eliminates the need for any eigenvector computation for graph clustering problems, which can be prohibitive for very large graphs. Previous multilevel graph partitioning methods, such as Metis, have suffered from the restriction of equal-sized clusters; our multilevel algorithm removes this restriction by using kernel k-means to optimize weighted graph cuts. Experimental results show that our multilevel algorithm outperforms a state-of-the-art spectral clustering algorithm in terms of speed, memory usage, and quality. We demonstrate that our algorithm is applicable to large-scale clustering tasks such as image segmentation, social network analysis and gene network analysis.

Mesh:

Year:  2007        PMID: 17848776     DOI: 10.1109/TPAMI.2007.1115

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  28 in total

1.  Detecting non-uniform clusters in large-scale interaction graphs.

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2.  Affinity and Penalty Jointly Constrained Spectral Clustering With All-Compatibility, Flexibility, and Robustness.

Authors:  Pengjiang Qian; Yizhang Jiang; Shitong Wang; Kuan-Hao Su; Jun Wang; Lingzhi Hu; Raymond F Muzic
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2016-02-18       Impact factor: 10.451

3.  Reconstructing High-Quality Diffusion MRI Data from Orthogonal Slice-Undersampled Data Using Graph Convolutional Neural Networks.

Authors:  Yoonmi Hong; Geng Chen; Pew-Thian Yap; Dinggang Shen
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4.  Multifold Acceleration of Diffusion MRI via Deep Learning Reconstruction from Slice-Undersampled Data.

Authors:  Yoonmi Hong; Geng Chen; Pew-Thian Yap; Dinggang Shen
Journal:  Inf Process Med Imaging       Date:  2019-05-22

5.  Viewing Computer Science through Citation Analysis: Salton and Bergmark Redux.

Authors:  Sitaram Devarakonda; Dmitriy Korobskiy; Tandy Warnow; George Chacko
Journal:  Scientometrics       Date:  2020-07-20       Impact factor: 3.238

6.  Geometric Brain Surface Network For Brain Cortical Parcellation.

Authors:  Wen Zhang; Yalin Wang
Journal:  Graph Learn Med Imaging (2019)       Date:  2019-11-14

7.  Efficient similarity-based data clustering by optimal object to cluster reallocation.

Authors:  Mathias Rossignol; Mathieu Lagrange; Arshia Cont
Journal:  PLoS One       Date:  2018-06-01       Impact factor: 3.240

8.  Segmentation of high angular resolution diffusion MRI using sparse riemannian manifold clustering.

Authors:  H Ertan Çetingül; Margaret J Wright; Paul M Thompson; René Vidal
Journal:  IEEE Trans Med Imaging       Date:  2013-10-03       Impact factor: 10.048

9.  Deep Learning Benchmarks on L1000 Gene Expression Data.

Authors:  Matthew B A McDermott; Jennifer Wang; Wen-Ning Zhao; Steven D Sheridan; Peter Szolovits; Isaac Kohane; Stephen J Haggarty; Roy H Perlis
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2020-12-08       Impact factor: 3.710

10.  Segmentation of striatal brain structures from high resolution PET images.

Authors:  Ricardo J P C Farinha; Ulla Ruotsalainen; Jussi Hirvonen; Lauri Tuominen; Jarmo Hietala; José M Fonseca; Jussi Tohka
Journal:  Int J Biomed Imaging       Date:  2009-11-04
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