Literature DB >> 17828568

Experimental evidence that GNA and TNA were not sequential polymers in the prebiotic evolution of RNA.

Ying-Wei Yang1, Su Zhang, Elizabeth O McCullum, John C Chaput.   

Abstract

Systematic investigation into the chemical etiology of ribose has led to the discovery of glycerol nucleic acid (GNA) and threose nucleic acid (TNA) as possible progenitor candidates of RNA in the origins of life. Coupled with their chemical simplicity, polymers for both systems are capable of forming stable Watson-Crick antiparallel duplex structures with themselves and RNA, thereby providing a mechanism for the transfer of genetic information between successive genetic systems. Investigation into whether both polymers arose independently or descended from a common evolutionary pathway would provide additional constraints on models that describe the emergence of a hypothetical RNA world. Here we show by thermal denaturation that complementary GNA and TNA mixed sequence polymers are unable, even after prolonged incubation times, to adopt stable helical structures by intersystem cross-pairing. This experimental observation suggests that GNA and TNA, whose structures derive from one another, were not consecutive polymers in the same evolutionary pathway to RNA.

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Year:  2007        PMID: 17828568     DOI: 10.1007/s00239-007-9017-9

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  17 in total

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3.  Structure of the 30S ribosomal subunit.

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Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

Review 4.  The antiquity of RNA-based evolution.

Authors:  Gerald F Joyce
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

5.  RNA evolution and the origins of life.

Authors:  G F Joyce
Journal:  Nature       Date:  1989-03-16       Impact factor: 49.962

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Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

7.  Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves.

Authors:  L A Marky; K J Breslauer
Journal:  Biopolymers       Date:  1987-09       Impact factor: 2.505

8.  Carbonaceous meteorites as a source of sugar-related organic compounds for the early Earth.

Authors:  G Cooper; N Kimmich; W Belisle; J Sarinana; K Brabham; L Garrel
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9.  Nonenzymatic oligomerization on templates containing phosphodiester-linked acyclic glycerol nucleic acid analogues.

Authors:  J C Chaput; C Switzer
Journal:  J Mol Evol       Date:  2000-11       Impact factor: 2.395

10.  Glycerol nucleoside triphosphates: synthesis and polymerase substrate activities.

Authors:  Allen T Horhota; Jack W Szostak; Larry W McLaughlin
Journal:  Org Lett       Date:  2006-11-09       Impact factor: 6.005

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  10 in total

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Review 2.  The RNA World: molecular cooperation at the origins of life.

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Authors:  Nicholas Chim; Changhua Shi; Sujay P Sau; Ali Nikoomanzar; John C Chaput
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5.  Synthesis and polymerase activity of a fluorescent cytidine TNA triphosphate analogue.

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6.  Processing of RNA Containing 8-Oxo-7,8-Dihydroguanosine (8-oxoG) by the Exoribonuclease Xrn-1.

Authors:  Cheyenne N Phillips; Shawn Schowe; Conner J Langeberg; Namoos Siddique; Erich G Chapman; Marino J E Resendiz
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7.  Overcoming GNA/RNA base-pairing limitations using isonucleotides improves the pharmacodynamic activity of ESC+ GalNAc-siRNAs.

Authors:  Mark K Schlegel; Shigeo Matsuda; Christopher R Brown; Joel M Harp; Joseph D Barry; Daniel Berman; Adam Castoreno; Sally Schofield; John Szeto; Muthiah Manoharan; Klaus Charissé; Martin Egli; Martin A Maier
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8.  Enzymatic primer-extension with glycerol-nucleoside triphosphates on DNA templates.

Authors:  Jesse J Chen; Ching-Hsuan Tsai; Xin Cai; Allen T Horhota; Larry W McLaughlin; Jack W Szostak
Journal:  PLoS One       Date:  2009-03-23       Impact factor: 3.240

9.  In Vitro Selection of an ATP-Binding TNA Aptamer.

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10.  Biologically stable threose nucleic acid-based probes for real-time microRNA detection and imaging in living cells.

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  10 in total

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