Literature DB >> 17804481

AtNUDX1, an 8-oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate pyrophosphohydrolase, is responsible for eliminating oxidized nucleotides in Arabidopsis.

Kazuya Yoshimura1, Takahisa Ogawa, Yayoi Ueda, Shigeru Shigeoka.   

Abstract

Cellular DNA, RNA and their precursor nucleotides are at high risk of being oxidized by reactive oxygen species. An oxidized base, 8-oxo-7,8-dihydro-2'-(deoxy)guanosine, can pair with both adenine and cytosine, and thus would cause both replicational and translational errors. Previously, we have reported that an Arabidopsis Nudix hydrolase, AtNUDX1, acts to hydrolyze an oxidized deoxyribonucleotide, 8-oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate (8-oxo-dGTP). Here we showed that 8-oxo-dGTP pyrophosphohydrolase activity is not exhibited by any other Arabidopsis Nudix hydrolase. AtNUDX1 acted on an oxidized ribonucleotide, 8-oxo-GTP, with high affinity (K(m) 28.1 microM). In a transcriptional mutational analysis using the lacZ reporter gene, the phenotypic suppression of the lacZ amber mutation in a mutT-deficient Escherichia coli strain caused by the misincorporation of 8-oxo-GTP into the mRNA was significantly diminished by expression of AtNUDX1. These findings suggest that AtNUDX1 prevents transcriptional errors in vivo. A confocal microscopic analysis using a green fluorescent protein (GFP) fusion protein demonstrated that AtNUDX1 is distributed in the cytosol, where the main pool of nucleotides in the cells exists. The level of 8-oxo-guanosine in genomic DNA was significantly increased in knockout nudx1 plants compared with wild-type plants under normal and oxidative stress (3 microM paraquat) conditions. The results obtained here indicate that AtNUDX1 functions in cellular defense against oxidative DNA and RNA damage through the sanitization of their precursor pools in the cytosol in Arabidopsis cells.

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Year:  2007        PMID: 17804481     DOI: 10.1093/pcp/pcm112

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  12 in total

Review 1.  Current perspectives on the clinical implications of oxidative RNA damage in aging research: challenges and opportunities.

Authors:  Zhijie Xu; Jinzhou Huang; Ming Gao; Guijie Guo; Shuangshuang Zeng; Xi Chen; Xiang Wang; Zhicheng Gong; Yuanliang Yan
Journal:  Geroscience       Date:  2020-06-11       Impact factor: 7.713

2.  Intragenic tRNA-promoted R-loops orchestrate transcription interference for plant oxidative stress responses.

Authors:  Kunpeng Liu; Qianwen Sun
Journal:  Plant Cell       Date:  2021-11-04       Impact factor: 12.085

3.  Molecular characterization of organelle-type Nudix hydrolases in Arabidopsis.

Authors:  Takahisa Ogawa; Kazuya Yoshimura; Hiroe Miyake; Kazuya Ishikawa; Daisuke Ito; Noriaki Tanabe; Shigeru Shigeoka
Journal:  Plant Physiol       Date:  2008-09-24       Impact factor: 8.340

4.  The role of AtNUDT7, a Nudix hydrolase, in the plant defense response.

Authors:  Xiaochun Ge; Yiji Xia
Journal:  Plant Signal Behav       Date:  2008-02

5.  Substrate ambiguity among the nudix hydrolases: biologically significant, evolutionary remnant, or both?

Authors:  Alexander G McLennan
Journal:  Cell Mol Life Sci       Date:  2012-11-27       Impact factor: 9.261

6.  Identification and characterization of Arabidopsis AtNUDX9 as a GDP-d-mannose pyrophosphohydrolase: its involvement in root growth inhibition in response to ammonium.

Authors:  Hiroyuki Tanaka; Takanori Maruta; Takahisa Ogawa; Noriaki Tanabe; Masahiro Tamoi; Kazuya Yoshimura; Shigeru Shigeoka
Journal:  J Exp Bot       Date:  2015-06-06       Impact factor: 6.992

7.  Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate.

Authors:  Lionel Trésaugues; Thomas Lundbäck; Martin Welin; Susanne Flodin; Tomas Nyman; Camilla Silvander; Susanne Gräslund; Pär Nordlund
Journal:  PLoS One       Date:  2015-06-29       Impact factor: 3.240

8.  Removal of 8-oxo-GTP by MutT hydrolase is not a major contributor to transcriptional fidelity.

Authors:  Alasdair J E Gordon; Dominik Satory; Mengyu Wang; Jennifer A Halliday; Ido Golding; Christophe Herman
Journal:  Nucleic Acids Res       Date:  2014-10-07       Impact factor: 16.971

9.  Functional characterization of a Nudix hydrolase AtNUDX8 upon pathogen attack indicates a positive role in plant immune responses.

Authors:  Jose Pedro Fonseca; Xinnian Dong
Journal:  PLoS One       Date:  2014-12-01       Impact factor: 3.240

10.  Mutational effects of γ-rays and carbon ion beams on Arabidopsis seedlings.

Authors:  Ryouhei Yoshihara; Shigeki Nozawa; Yoshihiro Hase; Issay Narumi; Jun Hidema; Ayako N Sakamoto
Journal:  J Radiat Res       Date:  2013-05-31       Impact factor: 2.724

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