Literature DB >> 17803865

A systematic review of the clinical, public health and cost-effectiveness of rapid diagnostic tests for the detection and identification of bacterial intestinal pathogens in faeces and food.

I Abubakar1, L Irvine, C F Aldus, G M Wyatt, R Fordham, S Schelenz, L Shepstone, A Howe, M Peck, P R Hunter.   

Abstract

OBJECTIVES: To determine the diagnostic accuracy of tests for the rapid diagnosis of bacterial food poisoning in clinical and public health practice and to estimate the cost-effectiveness of these assays in a hypothetical population in order to inform policy on the use of these tests. DATA SOURCES: Studies evaluating diagnostic accuracy of rapid tests were retrieved using electronic databases and handsearching reference lists and key journals. Hospital laboratories and test manufacturers were contacted for cost data, and clinicians involved in the care of patients with food poisoning were invited to discuss the conclusions of this review using the nominal group technique. REVIEW
METHODS: A systematic review of the current medical literature on assays used for the rapid diagnosis of bacterial food poisoning was carried out. Specific organisms under review were Salmonella, Campylobacter, Escherichia coli O157, Staphylococcus aureus, Clostridium perfringens and Bacillus cereus. Data extraction was undertaken using standardised data extraction forms. Where a sufficient number of studies evaluating comparable tests were identified, meta-analysis was performed. A decision analytic model was developed, using effectiveness data from the review and cost data from hospitals and manufacturers, which contributed to an assessment of the cost-effectiveness of rapid tests in a hypothetical UK population. Finally, diagnostic accuracy and cost-effectiveness results were presented to a focus group of GPs, microbiologists and consultants in communicable disease control, to assess professional opinion on the use of rapid tests in the diagnosis of food poisoning.
RESULTS: Good test performance levels were observed with rapid test methods, especially for polymerase chain reaction (PCR) assays. The estimated levels of diagnostic accuracy using the area under the curve of the summary receiver operating characteristic curve was very high. Indeed, although traditional culture is the natural reference test to use for comparative statistical analysis, on many occasions the rapid test outperforms culture, detecting additional 'truly' positive cases of food-borne illness. The significance of these additional positives requires further investigation. Economic modelling suggests that adoption of rapid tests in combination with routine culture is unlikely to be cost-effective, however, as the cost of rapid technologies decreases; total replacement with rapid technologies may be feasible.
CONCLUSIONS: Despite the relatively poor quality of reporting of studies evaluating rapid detection methods, the reviewed evidence shows that PCR for Campylobacter, Salmonella and E. coli O157 is potentially very successful in identifying pathogens, possibly detecting more than the number currently reported using culture. Less is known about the benefits of testing for B. cereus, C. perfringens and S. aureus. Further investigation is needed on how clinical outcomes may be altered if test results are available more quickly and at a greater precision than in the current practice of bacterial culture.

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Year:  2007        PMID: 17803865     DOI: 10.3310/hta11360

Source DB:  PubMed          Journal:  Health Technol Assess        ISSN: 1366-5278            Impact factor:   4.014


  14 in total

1.  Rapid affinity immunochromatography column-based tests for sensitive detection of Clostridium botulinum neurotoxins and Escherichia coli O157.

Authors:  Jason Brunt; Martin D Webb; Michael W Peck
Journal:  Appl Environ Microbiol       Date:  2010-04-30       Impact factor: 4.792

2.  Detection of representative enteropathogenic bacteria, Vibrio spp., pathogenic Escherichia coli, Salmonella spp., Shigella spp., and Yersinia enterocolitica, using a virulence factor gene-based oligonucleotide microarray.

Authors:  Dong-Hun Kim; Bok-Kwon Lee; Yong-Dae Kim; Sung-Keun Rhee; Young-Chang Kim
Journal:  J Microbiol       Date:  2010-11-03       Impact factor: 3.422

3.  Rapid identification of novel antigens of Salmonella Enteritidis by microarray-based immunoscreening.

Authors:  Lena Danckert; Sebastian Hoppe; Frank F Bier; Markus von Nickisch-Rosenegk
Journal:  Mikrochim Acta       Date:  2014-02-14       Impact factor: 5.833

Review 4.  Diagnostic Accuracy of Nucleic Acid Amplification-Based Assays for Clostridium perfringens-Associated Diseases: a Systematic Review and Meta-analysis.

Authors:  Ke Chen; Sarfraz Ahmed; Yun-Juan Sheng; Changfeng Sun; Cun-Liang Deng; Suvash Chandra Ojha
Journal:  J Clin Microbiol       Date:  2020-08-24       Impact factor: 5.948

5.  Campylobacter jejuni and Campylobacter coli in children from communities in Northeastern Brazil: molecular detection and relation to nutritional status.

Authors:  Josiane da Silva Quetz; Ila Fernanda Nunes Lima; Alexandre Havt; Eunice Bobo de Carvalho; Noélia Leal Lima; Alberto Melo Soares; Rosa Maria Salani Mota; Richard Littleton Guerrant; Aldo Angelo Moreira Lima
Journal:  Diagn Microbiol Infect Dis       Date:  2010-07       Impact factor: 2.803

6.  Simultaneous detection of Escherichia coli O157:H7, Staphylococcus aureus and Salmonella by multiplex PCR in milk.

Authors:  Caijiao Wei; Junliang Zhong; Ting Hu; Xihong Zhao
Journal:  3 Biotech       Date:  2018-01-13       Impact factor: 2.406

7.  Rapid detection of Salmonella sp. by means of a combination of selective enrichment broth and MALDI-TOF MS.

Authors:  K Sparbier; U Weller; C Boogen; M Kostrzewa
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2011-08-13       Impact factor: 3.267

8.  Simultaneous Screening of 24 Target Genes of Foodborne Pathogens in 35 Foodborne Outbreaks Using Multiplex Real-Time SYBR Green PCR Analysis.

Authors:  Hiroshi Fukushima; Jun Kawase; Yoshiki Etoh; Kumiko Sugama; Shunshuke Yashiro; Natsuko Iida; Keiji Yamaguchi
Journal:  Int J Microbiol       Date:  2010-09-28

9.  Evaluation of the impact of single nucleotide polymorphisms and primer mismatches on quantitative PCR.

Authors:  Brian Boyle; Nancy Dallaire; John MacKay
Journal:  BMC Biotechnol       Date:  2009-08-28       Impact factor: 2.563

10.  Comprehensive and rapid real-time PCR analysis of 21 foodborne outbreaks.

Authors:  Hiroshi Fukushima; Kazunori Katsube; Yoshie Tsunomori; Ryoko Kishi; Junko Atsuta; Yuko Akiba
Journal:  Int J Microbiol       Date:  2009-06-24
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