Literature DB >> 17785442

Human TOB, an antiproliferative transcription factor, is a poly(A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation.

Nader Ezzeddine1, Tsung-Cheng Chang, Wenmiao Zhu, Akio Yamashita, Chyi-Ying A Chen, Zhenping Zhong, Yukiko Yamashita, Dinghai Zheng, Ann-Bin Shyu.   

Abstract

In mammalian cells, mRNA decay begins with deadenylation, which involves two consecutive phases mediated by the PAN2-PAN3 and the CCR4-CAF1 complexes, respectively. The regulation of the critical deadenylation step and its relationship with RNA-processing bodies (P-bodies), which are thought to be a site where poly(A)-shortened mRNAs get degraded, are poorly understood. Using the Tet-Off transcriptional pulsing approach to investigate mRNA decay in mouse NIH 3T3 fibroblasts, we found that TOB, an antiproliferative transcription factor, enhances mRNA deadenylation in vivo. Results from glutathione S-transferase pull-down and coimmunoprecipitation experiments indicate that TOB can simultaneously interact with the poly(A) nuclease complex CCR4-CAF1 and the cytoplasmic poly(A)-binding protein, PABPC1. Combining these findings with those from mutagenesis studies, we further identified the protein motifs on TOB and PABPC1 that are necessary for their interaction and found that interaction with PABPC1 is necessary for TOB's deadenylation-enhancing effect. Moreover, our immunofluorescence microscopy results revealed that TOB colocalizes with P-bodies, suggesting a role of TOB in linking deadenylation to the P-bodies. Our findings reveal a new mechanism by which the fate of mammalian mRNA is modulated at the deadenylation step by a protein that recruits poly(A) nuclease(s) to the 3' poly(A) tail-PABP complex.

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Year:  2007        PMID: 17785442      PMCID: PMC2169145          DOI: 10.1128/MCB.01254-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  58 in total

1.  Interaction between a poly(A)-specific ribonuclease and the 5' cap influences mRNA deadenylation rates in vitro.

Authors:  M Gao; D T Fritz; L P Ford; J Wilusz
Journal:  Mol Cell       Date:  2000-03       Impact factor: 17.970

2.  Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits.

Authors:  T K Albert; M Lemaire; N L van Berkum; R Gentz; M A Collart; H T Timmers
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

3.  mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes.

Authors:  Isabelle Behm-Ansmant; Jan Rehwinkel; Tobias Doerks; Alexander Stark; Peer Bork; Elisa Izaurralde
Journal:  Genes Dev       Date:  2006-06-30       Impact factor: 11.361

Review 4.  P bodies: at the crossroads of post-transcriptional pathways.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Elisa Izaurralde
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

Review 5.  Early nonsense: mRNA decay solves a translational problem.

Authors:  Nadia Amrani; Matthew S Sachs; Allan Jacobson
Journal:  Nat Rev Mol Cell Biol       Date:  2006-06       Impact factor: 94.444

6.  PUF proteins bind Pop2p to regulate messenger RNAs.

Authors:  Aaron C Goldstrohm; Brad A Hook; Daniel J Seay; Marvin Wickens
Journal:  Nat Struct Mol Biol       Date:  2006-05-21       Impact factor: 15.369

Review 7.  AU-rich elements: characterization and importance in mRNA degradation.

Authors:  C Y Chen; A B Shyu
Journal:  Trends Biochem Sci       Date:  1995-11       Impact factor: 13.807

8.  Cap-dependent deadenylation of mRNA.

Authors:  E Dehlin; M Wormington; C G Körner; E Wahle
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

9.  Tob2, a novel anti-proliferative Tob/BTG1 family member, associates with a component of the CCR4 transcriptional regulatory complex capable of binding cyclin-dependent kinases.

Authors:  N Ikematsu; Y Yoshida; J Kawamura-Tsuzuku; M Ohsugi; M Onda; M Hirai; J Fujimoto; T Yamamoto
Journal:  Oncogene       Date:  1999-12-09       Impact factor: 9.867

10.  PUF protein-mediated deadenylation is catalyzed by Ccr4p.

Authors:  Aaron C Goldstrohm; Daniel J Seay; Brad A Hook; Marvin Wickens
Journal:  J Biol Chem       Date:  2006-11-07       Impact factor: 5.157

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  80 in total

1.  Nuclear import of cytoplasmic poly(A) binding protein restricts gene expression via hyperadenylation and nuclear retention of mRNA.

Authors:  G Renuka Kumar; Britt A Glaunsinger
Journal:  Mol Cell Biol       Date:  2010-09-07       Impact factor: 4.272

Review 2.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 3.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

4.  Phosphorylation of tristetraprolin by MK2 impairs AU-rich element mRNA decay by preventing deadenylase recruitment.

Authors:  Sandra L Clement; Claudia Scheckel; Georg Stoecklin; Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2010-11-15       Impact factor: 4.272

5.  Chapter 3. Assays of adenylate uridylate-rich element-mediated mRNA decay in cells.

Authors:  Riza M Ysla; Gerald M Wilson; Gary Brewer
Journal:  Methods Enzymol       Date:  2008       Impact factor: 1.600

6.  Biological role of the two overlapping poly(A)-binding protein interacting motifs 2 (PAM2) of eukaryotic releasing factor eRF3 in mRNA decay.

Authors:  Masanori Osawa; Nao Hosoda; Tamiji Nakanishi; Naoyuki Uchida; Tomomi Kimura; Shunsuke Imai; Asako Machiyama; Toshiaki Katada; Shin-ichi Hoshino; Ichio Shimada
Journal:  RNA       Date:  2012-09-27       Impact factor: 4.942

7.  hCAF1/CNOT7 regulates interferon signalling by targeting STAT1.

Authors:  Clément Chapat; Chloé Kolytcheff; Muriel Le Romancer; Didier Auboeuf; Pierre De La Grange; Kamel Chettab; Stéphanie Sentis; Laura Corbo
Journal:  EMBO J       Date:  2013-02-05       Impact factor: 11.598

Review 8.  Nanos genes and their role in development and beyond.

Authors:  Evi De Keuckelaere; Paco Hulpiau; Yvan Saeys; Geert Berx; Frans van Roy
Journal:  Cell Mol Life Sci       Date:  2018-02-03       Impact factor: 9.261

9.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

10.  The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation.

Authors:  Akhmed Aslam; Saloni Mittal; Frederic Koch; Jean-Christophe Andrau; G Sebastiaan Winkler
Journal:  Mol Biol Cell       Date:  2009-07-15       Impact factor: 4.138

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