Literature DB >> 17784760

Second SH3 domain of ponsin solved from powder diffraction.

Irene Margiolaki1, Jonathan P Wright, Matthias Wilmanns, Andrew N Fitch, Nikos Pinotsis.   

Abstract

Determination of protein crystal structures is dependent on the growth of high-quality single crystals, a process that is not always successful. Optimum crystallization conditions must be systematically sought for, and microcrystalline powders are frequently obtained in failed attempts to grow the desired crystal. In materials science, structures of samples ranging from ceramics, pharmaceuticals, zeolites, etc., can nowadays be solved, almost routinely, from powdered samples, and there seems to be no fundamental reason, except the sheer size and complexity of the structures involved, why powder diffraction should not be employed to solve structures of small proteins. Indeed, recent work has shown that the high-quality powder diffraction data can be used in the study of protein crystal structures. We report the solution, model building, and refinement of a 67-residue protein domain crystal structure, with a cell volume of 64 879 A3, from powder diffraction. The second SH3 domain of ponsin, a protein of high biological significance due to its role in cellular processes, is determined and refined to resolution limits comparable to single-crystal techniques. Our results demonstrate the power and future applicability of the powder technique in structural biology.

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Year:  2007        PMID: 17784760     DOI: 10.1021/ja073846c

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

1.  A new approach for structure analysis of two-dimensional membrane protein crystals using X-ray powder diffraction data.

Authors:  R A Dilanian; C Darmanin; J N Varghese; S W Wilkins; T Oka; N Yagi; H M Quiney; K A Nugent
Journal:  Protein Sci       Date:  2011-01-18       Impact factor: 6.725

2.  Practical considerations over spectral quality in solid state NMR spectroscopy of soluble proteins.

Authors:  Marco Fragai; Claudio Luchinat; Giacomo Parigi; Enrico Ravera
Journal:  J Biomol NMR       Date:  2013-08-30       Impact factor: 2.835

3.  Coxsackievirus B3 protease 3C: expression, purification, crystallization and preliminary structural insights.

Authors:  Stavroula Fili; Alexandros Valmas; Magdalini Christopoulou; Maria Spiliopoulou; Nikos Nikolopoulos; Julie Lichière; Souzana Logotheti; Fotini Karavassili; Eleftheria Rosmaraki; Andrew Fitch; Jonathan Wright; Detlef Beckers; Thomas Degen; Gwilherm Nénert; Rolf Hilgenfeld; Nicolas Papageorgiou; Bruno Canard; Bruno Coutard; Irene Margiolaki
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-11-25       Impact factor: 1.056

4.  Exploiting powder X-ray diffraction for direct structure determination in structural biology: the P2X4 receptor trafficking motif YEQGL.

Authors:  Kotaro Fujii; Mark T Young; Kenneth D M Harris
Journal:  J Struct Biol       Date:  2011-03-05       Impact factor: 2.867

Review 5.  In Quest for Improved Drugs against Diabetes: The Added Value of X-ray Powder Diffraction Methods.

Authors:  Fotini Karavassili; Alexandros Valmas; Stavroula Fili; Christos D Georgiou; Irene Margiolaki
Journal:  Biomolecules       Date:  2017-08-22
  5 in total

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