Literature DB >> 17768349

Crystallization and preliminary X-ray crystallographic study of [NiFe]-hydrogenase maturation factor HypE from Thermococcus kodakaraensis KOD1.

Takayuki Arai1, Satoshi Watanabe, Rie Matsumi, Haruyuki Atomi, Tadayuki Imanaka, Kunio Miki.   

Abstract

The hydrogenase maturation protein HypE is involved in the biosynthesis of the CN ligands of the active-site iron of [NiFe] hydrogenases using carbamoylphosphate as a substrate. Here, the crystallization and preliminary crystallographic analysis of HypE from Thermococcus kodakaraensis KOD1 are reported. Crystals of HypE (338 amino acids, 35.9 kDa) have been obtained by the sitting-drop vapour-diffusion method using 2-methyl-2,4-pentanediol (MPD) as a precipitant. The crystals belong to space group P2(1)2(1)2, with unit-cell parameters a = 88.3, b = 45.8, c = 75.1 A. There is one HypE molecule in the asymmetric unit. A complete native X-ray diffraction data set was collected to a maximum resolution of 1.55 A at 100 K.

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Year:  2007        PMID: 17768349      PMCID: PMC2376326          DOI: 10.1107/S1744309107038833

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  26 in total

1.  Dissection of the maturation reactions of the [NiFe] hydrogenase 3 from Escherichia coli taking place after nickel incorporation.

Authors:  A Magalon; A Böck
Journal:  FEBS Lett       Date:  2000-05-12       Impact factor: 4.124

Review 2.  Classification and phylogeny of hydrogenases.

Authors:  P M Vignais; B Billoud; J Meyer
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

3.  HypF, a carbamoyl phosphate-converting enzyme involved in [NiFe] hydrogenase maturation.

Authors:  Athanasios Paschos; Anette Bauer; Anja Zimmermann; Eva Zehelein; August Böck
Journal:  J Biol Chem       Date:  2002-10-10       Impact factor: 5.157

4.  Analysis of the HypC-hycE complex, a key intermediate in the assembly of the metal center of the Escherichia coli hydrogenase 3.

Authors:  A Magalon; A Bock
Journal:  J Biol Chem       Date:  2000-07-14       Impact factor: 5.157

5.  The complex between hydrogenase-maturation proteins HypC and HypD is an intermediate in the supply of cyanide to the active site iron of [NiFe]-hydrogenases.

Authors:  Melanie Blokesch; Simon P J Albracht; Berthold F Matzanke; Nikola M Drapal; Alexander Jacobi; August Böck
Journal:  J Mol Biol       Date:  2004-11-12       Impact factor: 5.469

6.  Taming of a poison: biosynthesis of the NiFe-hydrogenase cyanide ligands.

Authors:  Stefanie Reissmann; Elisabeth Hochleitner; Haofan Wang; Athanasios Paschos; Friedrich Lottspeich; Richard S Glass; August Böck
Journal:  Science       Date:  2003-02-14       Impact factor: 47.728

7.  Requirement of nickel metabolism proteins HypA and HypB for full activity of both hydrogenase and urease in Helicobacter pylori.

Authors:  J W Olson; N S Mehta; R J Maier
Journal:  Mol Microbiol       Date:  2001-01       Impact factor: 3.501

Review 8.  Chemistry and the hydrogenases.

Authors:  David J Evans; Christopher J Pickett
Journal:  Chem Soc Rev       Date:  2003-09       Impact factor: 54.564

9.  Analysis of the transcarbamoylation-dehydration reaction catalyzed by the hydrogenase maturation proteins HypF and HypE.

Authors:  Melanie Blokesch; Athanasios Paschos; Anette Bauer; Stefanie Reissmann; Nikola Drapal; August Böck
Journal:  Eur J Biochem       Date:  2004-08

10.  Maturation of [NiFe]-hydrogenases in Escherichia coli: the HypC cycle.

Authors:  Melanie Blokesch; August Böck
Journal:  J Mol Biol       Date:  2002-11-22       Impact factor: 5.469

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  1 in total

1.  Crystal structures of the carbamoylated and cyanated forms of HypE for [NiFe] hydrogenase maturation.

Authors:  Taiga Tominaga; Satoshi Watanabe; Rie Matsumi; Haruyuki Atomi; Tadayuki Imanaka; Kunio Miki
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-02       Impact factor: 11.205

  1 in total

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