Literature DB >> 17766443

Low-load compression testing: a novel way of measuring biofilm thickness.

Ekaterina Paramonova1, Ed D de Jong, Bastiaan P Krom, Henny C van der Mei, Henk J Busscher, Prashant K Sharma.   

Abstract

Biofilms are complex and dynamic communities of microorganisms that are studied in many fields due to their abundance and economic impact. Biofilm thickness is an important parameter in biofilm characterization. Current methods of measuring biofilm thicknesses have several limitations, including application, availability, and costs. Here, we present low-load compression testing (LLCT) as a new method for measuring biofilm thickness. With LLCT, biofilm thicknesses are measured during compression by inducing small loads, up to 5 Pa, corresponding to 0.1% deformation, making LLCT essentially a nondestructive technique. Comparison of the thicknesses of various bacterial and yeasts biofilms obtained by LLCT and by using confocal laser scanning microscopy (CLSM) resulted in the conclusion that CLSM underestimates the biofilm thickness due to poor penetration of different fluorescent dyes, especially through the thicker biofilms, whereas LLCT does not suffer from this thickness limitation.

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Year:  2007        PMID: 17766443      PMCID: PMC2074951          DOI: 10.1128/AEM.00935-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  17 in total

1.  Uniaxial compression measurement device for investigation of the mechanical stability of biofilms.

Authors:  V Körstgens; H C Flemming; J Wingender; W Borchard
Journal:  J Microbiol Methods       Date:  2001-07-30       Impact factor: 2.363

Review 2.  Diffusion in biofilms.

Authors:  Philip S Stewart
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

3.  Quantification of biofilm structures by the novel computer program COMSTAT.

Authors:  A Heydorn; A T Nielsen; M Hentzer; C Sternberg; M Givskov; B K Ersbøll; S Molin
Journal:  Microbiology       Date:  2000-10       Impact factor: 2.777

4.  Measuring local flow velocities and biofilm structure in biofilm systems with magnetic resonance imaging (MRI).

Authors:  Bertram Manz; Frank Volke; Danile Goll; Harald Horn
Journal:  Biotechnol Bioeng       Date:  2003-11-20       Impact factor: 4.530

5.  Effects of current velocity on the nascent architecture of stream microbial biofilms.

Authors:  Tom J Battin; Louis A Kaplan; J Denis Newbold; Xianhao Cheng; Claude Hansen
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

6.  Optimized candidal biofilm microtiter assay.

Authors:  Bastiaan P Krom; Jesse B Cohen; Gail E McElhaney Feser; Ronald L Cihlar
Journal:  J Microbiol Methods       Date:  2006-09-26       Impact factor: 2.363

7.  Influence of calcium ions on the mechanical properties of a model biofilm of mucoid Pseudomonas aeruginosa.

Authors:  V Körstgens; H C Flemming; J Wingender; W Borchard
Journal:  Water Sci Technol       Date:  2001       Impact factor: 1.915

8.  Genogrouping and incidence of virulence factors of Enterococcus faecalis in liver transplant patients differ from blood culture and fecal isolates.

Authors:  Karola Waar; Albrecht B Muscholl-Silberhorn; Rob J L Willems; Maarten J H Slooff; Hermie J M Harmsen; John E Degener
Journal:  J Infect Dis       Date:  2002-04-01       Impact factor: 5.226

Review 9.  Biofilms: survival mechanisms of clinically relevant microorganisms.

Authors:  Rodney M Donlan; J William Costerton
Journal:  Clin Microbiol Rev       Date:  2002-04       Impact factor: 26.132

10.  Quantification of biofilm accumulation by an optical approach.

Authors:  R Bakke; R Kommedal; S Kalvenes
Journal:  J Microbiol Methods       Date:  2001-02-01       Impact factor: 2.363

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  11 in total

1.  Application of paramagnetically tagged molecules for magnetic resonance imaging of biofilm mass transport processes.

Authors:  B Ramanan; W M Holmes; W T Sloan; V R Phoenix
Journal:  Appl Environ Microbiol       Date:  2010-04-30       Impact factor: 4.792

2.  Magnetic resonance imaging of mass transport and structure inside a phototrophic biofilm.

Authors:  Baheerathan Ramanan; William M Holmes; William T Sloan; Vernon R Phoenix
Journal:  Curr Microbiol       Date:  2013-01-10       Impact factor: 2.188

3.  Quantifying dental biofilm growth using cross-polarization optical coherence tomography.

Authors:  R Chen; J Rudney; C Aparicio; A Fok; R S Jones
Journal:  Lett Appl Microbiol       Date:  2012-04-10       Impact factor: 2.858

4.  A flow cytometric approach to quantify biofilms.

Authors:  Monique Kerstens; Gaëlle Boulet; Marian Van Kerckhoven; Sofie Clais; Ellen Lanckacker; Peter Delputte; Louis Maes; Paul Cos
Journal:  Folia Microbiol (Praha)       Date:  2015-05-07       Impact factor: 2.099

5.  R-based method for quantitative analysis of biofilm thickness by using confocal laser scanning microscopy.

Authors:  Hanna Marianne Frühauf; Markus Stöckl; Dirk Holtmann
Journal:  Eng Life Sci       Date:  2022-04-11       Impact factor: 3.405

6.  Carnitine-dependent transport of acetyl coenzyme A in Candida albicans is essential for growth on nonfermentable carbon sources and contributes to biofilm formation.

Authors:  Karin Strijbis; Carlo W T van Roermund; Wouter F Visser; Els C Mol; Janny van den Burg; Donna M MacCallum; Frank C Odds; Ekaterina Paramonova; Bastiaan P Krom; Ben Distel
Journal:  Eukaryot Cell       Date:  2008-02-15

7.  Salmonella enterica biofilm-mediated dispersal by nitric oxide donors in association with cellulose nanocrystal hydrogels.

Authors:  Massimiliano Marvasi; Ian A Durie; Eric S McLamore; Diana C Vanegas; Prachee Chaturvedi
Journal:  AMB Express       Date:  2015-05-23       Impact factor: 3.298

Review 8.  Towards standardized mechanical characterization of microbial biofilms: analysis and critical review.

Authors:  Héloïse Boudarel; Jean-Denis Mathias; Benoît Blaysat; Michel Grédiac
Journal:  NPJ Biofilms Microbiomes       Date:  2018-08-20       Impact factor: 7.290

9.  Viscoelastic properties of Pseudomonas aeruginosa variant biofilms.

Authors:  Erin S Gloag; Guy K German; Paul Stoodley; Daniel J Wozniak
Journal:  Sci Rep       Date:  2018-06-26       Impact factor: 4.996

10.  DNA-microarrays identification of Streptococcus mutans genes associated with biofilm thickness.

Authors:  Moshe Shemesh; Avshalom Tam; Miriam Kott-Gutkowski; Mark Feldman; Doron Steinberg
Journal:  BMC Microbiol       Date:  2008-12-29       Impact factor: 3.605

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