Literature DB >> 17762873

SNPs matter: impact on detection of differential expression.

Nicole A R Walter, Shannon K McWeeney, Sandra T Peters, John K Belknap, Robert Hitzemann, Kari J Buck.   

Abstract

Mesh：

Year:  2007        PMID： 17762873      PMCID： PMC3410665          DOI： 10.1038/nmeth0907-679

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  1 in total

1.  SNPs matter: impact on detection of differential expression.

Authors:  Nicole A R Walter; Shannon K McWeeney; Sandra T Peters; John K Belknap; Robert Hitzemann; Kari J Buck
Journal:  Nat Methods       Date:  2007-09       Impact factor: 28.547
  1 in total
  46 in total

1.  Quantitative trait locus mapping of acute functional tolerance in the LXS recombinant inbred strains.

Authors:  Beth Bennett; Colin Larson; Phillip A Richmond; Aaron T Odell; Laura M Saba; Boris Tabakoff; Robin Dowell; Richard A Radcliffe
Journal:  Alcohol Clin Exp Res       Date:  2015-04       Impact factor: 3.455

2.  SNPs matter: impact on detection of differential expression.

Authors:  Nicole A R Walter; Shannon K McWeeney; Sandra T Peters; John K Belknap; Robert Hitzemann; Kari J Buck
Journal:  Nat Methods       Date:  2007-09       Impact factor: 28.547

3.  Accurate discovery of expression quantitative trait loci under confounding from spurious and genuine regulatory hotspots.

Authors:  Hyun Min Kang; Chun Ye; Eleazar Eskin
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

4.  Transcriptome analysis of Inbred Long Sleep and Inbred Short Sleep mice.

Authors:  T M Darlington; M A Ehringer; C Larson; T L Phang; R A Radcliffe
Journal:  Genes Brain Behav       Date:  2013-03       Impact factor: 3.449

5.  The genomic determinants of alcohol preference in mice.

Authors:  Boris Tabakoff; Laura Saba; Katherina Kechris; Wei Hu; Sanjiv V Bhave; Deborah A Finn; Nicholas J Grahame; Paula L Hoffman
Journal:  Mamm Genome       Date:  2008-06-19       Impact factor: 2.957

6.  To What Extent is Blood a Reasonable Surrogate for Brain in Gene Expression Studies: Estimation from Mouse Hippocampus and Spleen.

Authors:  Matthew N Davies; Sarah Lawn; Steven Whatley; Cathy Fernandes; Robert W Williams; Leonard C Schalkwyk
Journal:  Front Neurosci       Date:  2009-10-09       Impact factor: 4.677

7.  Transcript profiling of two alfalfa genotypes with contrasting cell wall composition in stems using a cross-species platform: optimizing analysis by masking biased probes.

Authors:  S Samuel Yang; Wayne Wenzhong Xu; Mesfin Tesfaye; JoAnn F S Lamb; Hans-Joachim G Jung; Kathryn A VandenBosch; Carroll P Vance; John W Gronwald
Journal:  BMC Genomics       Date:  2010-05-24       Impact factor: 3.969

8.  High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs.

Authors:  Nicole A R Walter; Daniel Bottomly; Ted Laderas; Michael A Mooney; Priscila Darakjian; Robert P Searles; Christina A Harrington; Shannon K McWeeney; Robert Hitzemann; Kari J Buck
Journal:  BMC Genomics       Date:  2009-08-17       Impact factor: 3.969

9.  Evaluation of the impact of single nucleotide polymorphisms and primer mismatches on quantitative PCR.

Authors:  Brian Boyle; Nancy Dallaire; John MacKay
Journal:  BMC Biotechnol       Date:  2009-08-28       Impact factor: 2.563

10.  Identification of brain transcriptional variation reproduced in peripheral blood: an approach for mapping brain expression traits.

Authors:  Anna J Jasinska; Susan Service; Oi-wa Choi; Joseph DeYoung; Olivera Grujic; Sit-yee Kong; Matthew J Jorgensen; Julia Bailey; Sherry Breidenthal; Lynn A Fairbanks; Roger P Woods; J David Jentsch; Nelson B Freimer
Journal:  Hum Mol Genet       Date:  2009-08-19       Impact factor: 6.150
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