Literature DB >> 1774785

Strand symmetry of mutation rates in the beta-globin region.

M Bulmer1.   

Abstract

It has been suggested that there may be inequalities in the types of substitution on the two DNA strands (in particular, in the frequencies of transversions from R to Y and from Y to R) due to a higher error rate on the lagging than the leading strand during replication. Reexamination of 11 kb of the beta-globin region sequenced in six primates fails to confirm this suggestion. Examination of the 73-kb beta-globin region sequenced in humans shows that the frequency of pyrimidines in different parts of this region is more variable than expected in a random sequence, but the pattern is more consistent with nonrandomness generated by DNA turnover mechanisms than with strand asymmetry due to a higher error rate on the lagging strand.

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Year:  1991        PMID: 1774785     DOI: 10.1007/bf02102861

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  12 in total

1.  Complementary base pairing and the origin of substitution mutations.

Authors:  M D Topal; J R Fresco
Journal:  Nature       Date:  1976-09-23       Impact factor: 49.962

Review 2.  The isochore organization of the human genome.

Authors:  G Bernardi
Journal:  Annu Rev Genet       Date:  1989       Impact factor: 16.830

3.  Inequality in mutation rates of the two strands of DNA.

Authors:  C I Wu; N Maeda
Journal:  Nature       Date:  1987 May 14-20       Impact factor: 49.962

4.  Eucaryotic DNA: organization of the genome for replication.

Authors:  R Hand
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

5.  Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications.

Authors:  W H Li; C I Wu; C C Luo
Journal:  J Mol Evol       Date:  1984       Impact factor: 2.395

Review 6.  Eukaryotic chromosome replication.

Authors:  H J Edenberg; J A Huberman
Journal:  Annu Rev Genet       Date:  1975       Impact factor: 16.830

7.  Cryptic simplicity in DNA is a major source of genetic variation.

Authors:  D Tautz; M Trick; G A Dover
Journal:  Nature       Date:  1986 Aug 14-20       Impact factor: 49.962

Review 8.  Molecular phylogeny of the family of apes and humans.

Authors:  M Goodman; B F Koop; J Czelusniak; D H Fitch; D A Tagle; J L Slightom
Journal:  Genome       Date:  1989       Impact factor: 2.166

9.  Recombination and balanced chromosome polymorphism suggested by DNA sequences 5' to the human delta-globin gene.

Authors:  N Maeda; J B Bliska; O Smithies
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

10.  DNA polymerase accuracy and spontaneous mutation rates: frequencies of purine.purine, purine.pyrimidine, and pyrimidine.pyrimidine mismatches during DNA replication.

Authors:  A R Fersht; J W Knill-Jones
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

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  8 in total

1.  Mutation patterns of mitochondrial H- and L-strand DNA in closely related Cyprinid fishes.

Authors:  Joseph P Bielawski; John R Gold
Journal:  Genetics       Date:  2002-08       Impact factor: 4.562

2.  Strand compositional asymmetries of nuclear DNA in eukaryotes.

Authors:  Deng K Niu; Kui Lin; Da-Yong Zhang
Journal:  J Mol Evol       Date:  2003-09       Impact factor: 2.395

Review 3.  Evolutionary consequences of nonrandom damage and repair of chromatin domains.

Authors:  T Boulikas
Journal:  J Mol Evol       Date:  1992-08       Impact factor: 2.395

4.  A neo-Darwinian algorithm: asymmetrical mutations due to semiconservative DNA-type replication promote evolution.

Authors:  K N Wada; H Doi; S Tanaka; Y Wada; M Furusawa
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

5.  Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins.

Authors:  Marie Touchon; Samuel Nicolay; Benjamin Audit; Edward-Benedict Brodie of Brodie; Yves d'Aubenton-Carafa; Alain Arneodo; Claude Thermes
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-28       Impact factor: 11.205

6.  Dependence of mutational asymmetry on gene-expression levels in the human genome.

Authors:  Jacek Majewski
Journal:  Am J Hum Genet       Date:  2003-07-24       Impact factor: 11.025

7.  Inferring the pattern of spontaneous mutation from the pattern of substitution in unitary pseudogenes of Mycobacterium leprae and a comparison of mutation patterns among distantly related organisms.

Authors:  Amir Mitchell; Dan Graur
Journal:  J Mol Evol       Date:  2005-11-02       Impact factor: 3.973

8.  Selection on synonymous codons in mammalian rhodopsins: a possible role in optimizing translational processes.

Authors:  Jingjing Du; Sarah Z Dungan; Amir Sabouhanian; Belinda S W Chang
Journal:  BMC Evol Biol       Date:  2014-05-03       Impact factor: 3.260

  8 in total

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