Literature DB >> 17727659

Impact of systems biology on metabolic engineering of Saccharomyces cerevisiae.

Jens Nielsen1, Michael C Jewett.   

Abstract

Industrial biotechnology is a rapidly growing field. With the increasing shift towards a bio-based economy, there is rising demand for developing efficient cell factories that can produce fuels, chemicals, pharmaceuticals, materials, nutraceuticals, and even food ingredients. The yeast Saccharomyces cerevisiae is extremely well suited for this objective. As one of the most intensely studied eukaryotic model organisms, a rich density of knowledge detailing its genetics, biochemistry, physiology, and large-scale fermentation performance can be capitalized upon to enable a substantial increase in the industrial application of this yeast. Developments in genomics and high-throughput systems biology tools are enhancing one's ability to rapidly characterize cellular behaviour, which is valuable in the field of metabolic engineering where strain characterization is often the bottleneck in strain development programmes. Here, the impact of systems biology on metabolic engineering is reviewed and perspectives on the role of systems biology in the design of cell factories are given.

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Year:  2007        PMID: 17727659     DOI: 10.1111/j.1567-1364.2007.00302.x

Source DB:  PubMed          Journal:  FEMS Yeast Res        ISSN: 1567-1356            Impact factor:   2.796


  36 in total

1.  The yeast product Milmed enhances the effect of physical exercise on motor performance and dopamine neurochemistry recovery in MPTP-lesioned mice.

Authors:  Trevor Archer; Anders Fredriksson
Journal:  Neurotox Res       Date:  2013-07-27       Impact factor: 3.911

2.  Development of a Recombinant Escherichia coli Strain for Overproduction of the Plant Pigment Anthocyanin.

Authors:  Chin Giaw Lim; Lynn Wong; Namita Bhan; Hila Dvora; Peng Xu; Sankaranarayanan Venkiteswaran; Mattheos A G Koffas
Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

Review 3.  Metabolic engineering of Saccharomyces cerevisiae: a key cell factory platform for future biorefineries.

Authors:  Kuk-Ki Hong; Jens Nielsen
Journal:  Cell Mol Life Sci       Date:  2012-03-03       Impact factor: 9.261

Review 4.  Protein folding and secretion: mechanistic insights advancing recombinant protein production in S. cerevisiae.

Authors:  Carissa L Young; Anne S Robinson
Journal:  Curr Opin Biotechnol       Date:  2014-07-15       Impact factor: 9.740

Review 5.  Multi-tissue to whole plant metabolic modelling.

Authors:  Rahul Shaw; C Y Maurice Cheung
Journal:  Cell Mol Life Sci       Date:  2019-11-20       Impact factor: 9.261

6.  BioMet Toolbox: genome-wide analysis of metabolism.

Authors:  Marija Cvijovic; Roberto Olivares-Hernández; Rasmus Agren; Niklas Dahr; Wanwipa Vongsangnak; Intawat Nookaew; Kiran Raosaheb Patil; Jens Nielsen
Journal:  Nucleic Acids Res       Date:  2010-05-18       Impact factor: 16.971

7.  Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement.

Authors:  Bevan Ks Chung; Suresh Selvarasu; Camattari Andrea; Jimyoung Ryu; Hyeokweon Lee; Jungoh Ahn; Hongweon Lee; Dong-Yup Lee
Journal:  Microb Cell Fact       Date:  2010-07-01       Impact factor: 5.328

Review 8.  Accomplishments in genome-scale in silico modeling for industrial and medical biotechnology.

Authors:  Caroline B Milne; Pan-Jun Kim; James A Eddy; Nathan D Price
Journal:  Biotechnol J       Date:  2009-12       Impact factor: 4.677

9.  Improving biobutanol production in engineered Saccharomyces cerevisiae by manipulation of acetyl-CoA metabolism.

Authors:  Anastasia Krivoruchko; Cristina Serrano-Amatriain; Yun Chen; Verena Siewers; Jens Nielsen
Journal:  J Ind Microbiol Biotechnol       Date:  2013-06-13       Impact factor: 3.346

Review 10.  Progress in metabolic engineering of Saccharomyces cerevisiae.

Authors:  Elke Nevoigt
Journal:  Microbiol Mol Biol Rev       Date:  2008-09       Impact factor: 11.056

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