Literature DB >> 17721789

Direct determination of the effects of genotype and extreme temperature on the transposition of roo in long-term mutation accumulation lines of Drosophila melanogaster.

J Fernando Vázquez1, Jesús Albornoz, Ana Domínguez.   

Abstract

Transposable elements (TEs) are mobile repetitive DNA sequences that constitute a structurally dynamic component of genomes. In order to understand the dynamics of TEs it is necessary to have information about the control of transposition and its dependence of environmental factors. After a great deal of previous work on transposition conducted on long-term mutation accumulation (MA) lines of Drosophila melanogaster started in 1987, only roo out of 16 families was found active in this genotype. Here we test the effect of the modification of the genetic background by introducing a Cy chromosome, and the effect of extreme temperature (28 degrees C) on the transposition rate of roo. Thermal stress did not affect the transposition rate, whereas the presence of a Cy chromosome in heterozygosis lowered it. There was an excess of insertions in the X chromosome, with respect to autosomes, and in the proximal and distal regions of chromosome arms that can be interpreted as target site preference. One of the control lines became highly unstable with mean insertion and excision rates of 3.0 x 10(-3) and 8.5 x 10(-4), respectively. Instability arose spontaneously during generations of mutation accumulation, and can be attributed to "de novo" mutation. Transposition in the unstable line could be directly studied on the progeny of individual males and females, from where we deduced that transposition occurs mainly, if not exclusively, in males, with a rate of 1.125 insertions per gamete. In situ hybridization with an LTR probe showed that most excisions (12 out of 14) were precise. Our data show the prominent role of genotype in transposition control and can explain rapid turnovers in the genome without increasing the number of copies.

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Year:  2007        PMID: 17721789     DOI: 10.1007/s00438-007-0282-5

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  55 in total

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Journal:  Genetics       Date:  2007-02-04       Impact factor: 4.562

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Journal:  Mol Biol Evol       Date:  2004-12-01       Impact factor: 16.240

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Journal:  Genetics       Date:  2004-03       Impact factor: 4.562

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Journal:  Genetics       Date:  1980-05       Impact factor: 4.562

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Journal:  Mol Gen Genet       Date:  1995-01-20
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  7 in total

Review 1.  What makes transposable elements move in the Drosophila genome?

Authors:  M P García Guerreiro
Journal:  Heredity (Edinb)       Date:  2011-10-05       Impact factor: 3.821

2.  Support for the evolutionary speed hypothesis from intraspecific population genetic data in the non-biting midge Chironomus riparius.

Authors:  Ann-Marie Oppold; João A M Pedrosa; Miklós Bálint; João B Diogo; Julia Ilkova; João L T Pestana; Markus Pfenninger
Journal:  Proc Biol Sci       Date:  2016-02-24       Impact factor: 5.349

3.  The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster.

Authors:  S Yu Funikov; S S Ryazansky; E S Zelentsova; V I Popenko; O G Leonova; D G Garbuz; M B Evgen'ev; O G Zatsepina
Journal:  Mob Genet Elements       Date:  2015-09-11

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Authors:  Julia Díaz-González; Ana Domínguez; Jesús Albornoz
Journal:  Genetica       Date:  2009-12-11       Impact factor: 1.082

5.  Abundance and distribution of transposable elements in two Drosophila QTL mapping resources.

Authors:  Julie M Cridland; Stuart J Macdonald; Anthony D Long; Kevin R Thornton
Journal:  Mol Biol Evol       Date:  2013-07-24       Impact factor: 16.240

6.  Genome-Wide Estimates of Transposable Element Insertion and Deletion Rates in Drosophila Melanogaster.

Authors:  Jeffrey R Adrion; Michael J Song; Daniel R Schrider; Matthew W Hahn; Sarah Schaack
Journal:  Genome Biol Evol       Date:  2017-05-01       Impact factor: 3.416

7.  Unique transposon landscapes are pervasive across Drosophila melanogaster genomes.

Authors:  Reazur Rahman; Gung-wei Chirn; Abhay Kanodia; Yuliya A Sytnikova; Björn Brembs; Casey M Bergman; Nelson C Lau
Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

  7 in total

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