Literature DB >> 17720911

Genomewide clonal analysis of lethal mutations in the Drosophila melanogaster eye: comparison of the X chromosome and autosomes.

Gerald B Call1, John M Olson, Jiong Chen, Nikki Villarasa, Kathy T Ngo, Allison M Yabroff, Shawn Cokus, Matteo Pellegrini, Elena Bibikova, Chris Bui, Albert Cespedes, Cheryl Chan, Stacy Chan, Amrita K Cheema, Akanksha Chhabra, Vida Chitsazzadeh, Minh-Tu Do, Q Angela Fang, Andrew Folick, Gelsey L Goodstein, Cheng R Huang, Tony Hung, Eunha Kim, William Kim, Yulee Kim, Emil Kohan, Edward Kuoy, Robert Kwak, Eric Lee, JiEun Lee, Henry Lin, H-C Angela Liu, Tatiana Moroz, Tharani Prasad, Sacha L Prashad, Alexander N Patananan, Alma Rangel, Desiree Rosselli, Sohrab Sidhu, Daniel Sitz, Chelsea E Taber, Jingwen Tan, Kasey Topp, PhuongThao Tran, Quynh-Minh Tran, Mary Unkovic, Maggie Wells, Jessica Wickland, Kevin Yackle, Amir Yavari, Jesse M Zaretsky, Christopher M Allen, Latifat Alli, Ju An, Abbas Anwar, Sonia Arevalo, Danny Ayoub, Shawn S Badal, Armonde Baghdanian, Arthur H Baghdanian, Sara A Baumann, Vivian N Becerra, Hei J Chan, Aileen E Chang, Xibin A Cheng, Mabel Chin, Fleurette Chong, Carlyn Crisostomo, Sanjit Datta, Angela Delosreyes, Francie Diep, Preethika Ekanayake, Mark Engeln, Elizabeth Evers, Farzin Farshidi, Katrina Fischer, Arlene J Formanes, Jun Gong, Riju Gupta, Blake E Haas, Vicky Hahm, Michael Hsieh, James Z Hui, Mei L Iao, Sophia D Jin, Angela Y Kim, Lydia S-H Kim, Megan King, Chloe Knudsen-Robbins, David Kohanchi, Bogdana Kovshilovskaya, Amy Ku, Raymond W Kung, Mark E L Landig, Stephanie S Latterman, Stephanie S Lauw, Daniel S Lee, Joann S Lee, Kai C Lei, Lesley L Leung, Renata Lerner, Jian-ya Lin, Kathleen Lin, Bryon C Lim, Crystal P Y Lui, Tiffany Q Liu, Vincent Luong, Jacob Makshanoff, An-Chi Mei, Miguel Meza, Yara A Mikhaeil, Majid Moarefi, Long H Nguyen, Shekhar S Pai, Manish Pandya, Aadit R Patel, Paul D Picard, Michael M Safaee, Carol Salame, Christian Sanchez, Nina Sanchez, Christina C Seifert, Abhishek Shah, Oganes H Shilgevorkyan, Inderroop Singh, Vanessa Soma, Junia J Song, Neetika Srivastava, Jennifer L StaAna, Christie Sun, Diane Tan, Alison S Teruya, Robyn Tikia, Trinh Tran, Emily G Travis, Jennifer D Trinh, Diane Vo, Thomas Walsh, Regan S Wong, Katherine Wu, Ya-Whey Wu, Nkau X V Yang, Michael Yeranosian, James S Yu, Jennifer J Zhou, Ran X Zhu, Anna Abrams, Amanda Abramson, Latiffe Amado, Jenny Anderson, Keenan Bashour, Elsa Beyer, Allen Bookatz, Sarah Brewer, Natalie Buu, Stephanie Calvillo, Joseph Cao, Amy Chan, Jenny Chan, Aileen Chang, Daniel Chang, Yuli Chang, YiBing Chen, Joo Choi, Jeyling Chou, Peter Dang, Sumit Datta, Ardy Davarifar, Artemis Deravanesian, Poonam Desai, Jordan Fabrikant, Shahbaz Farnad, Katherine Fu, Eddie Garcia, Nick Garrone, Srpouhi Gasparyan, Phyllis Gayda, Sherrylene Go, Chad Goffstein, Courtney Gonzalez, Mariam Guirguis, Ryan Hassid, Brenda Hermogeno, Julie Hong, Aria Hong, Lindsay Hovestreydt, Charles Hu, Devon Huff, Farid Jamshidian, James Jen, Katrin Kahen, Linda Kao, Melissa Kelley, Thomas Kho, Yein Kim, Sarah Kim, Brian Kirkpatrick, Adam Langenbacher, Santino Laxamana, Janet Lee, Chris Lee, So-Youn Lee, ToHang S Lee, Toni Lee, Gemma Lewis, Sheila Lezcano, Peter Lin, Thanh Luu, Julie Luu, Will Marrs, Erin Marsh, Jamie Marshall, Sarah Min, Tanya Minasian, Helena Minye, Amit Misra, Miles Morimoto, Yasaman Moshfegh, Jessica Murray, Kha Nguyen, Cynthia Nguyen, Ernesto Nodado, Amanda O'Donahue, Ndidi Onugha, Nneka Orjiakor, Bhavin Padhiar, Eric Paul, Mara Pavel-Dinu, Alex Pavlenko, Edwin Paz, Sarah Phaklides, Lephong Pham, Preethi Poulose, Russell Powell, Aya Pusic, Divi Ramola, Kirsten Regalia, Meghann Ribbens, Bassel Rifai, Manyak Saakyan, Pamela Saarikoski, Miriam Segura, Farnaz Shadpour, Aram Shemmassian, Ramnik Singh, Vivek Singh, Emily Skinner, Daniel Solomin, Kosha Soneji, Kristin Spivey, Erika Stageberg, Marina Stavchanskiy, Leena Tekchandani, Leo Thai, Jayantha Thiyanaratnam, Maurine Tong, Aneet Toor, Steve Tovar, Kelly Trangsrud, Wah-Yung Tsang, Marc Uemura, Emily Vollmer, Emily Weiss, Damien Wood, Joy Wu, Sophia Wu, Winston Wu, Qing Xu, Yuki Yamauchi, Will Yarosh, Laura Yee, George Yen, Utpal Banerjee.   

Abstract

Using a large consortium of undergraduate students in an organized program at the University of California, Los Angeles (UCLA), we have undertaken a functional genomic screen in the Drosophila eye. In addition to the educational value of discovery-based learning, this article presents the first comprehensive genomewide analysis of essential genes involved in eye development. The data reveal the surprising result that the X chromosome has almost twice the frequency of essential genes involved in eye development as that found on the autosomes.

Entities:  

Mesh:

Year:  2007        PMID: 17720911      PMCID: PMC2034635          DOI: 10.1534/genetics.107.077735

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


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Journal:  Nat Genet       Date:  2004-02-22       Impact factor: 38.330

5.  The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes.

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Journal:  Genetics       Date:  2004-06       Impact factor: 4.562

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Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

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Authors:  Jiong Chen; Gerald B Call; Elsa Beyer; Chris Bui; Albert Cespedes; Amy Chan; Jenny Chan; Stacy Chan; Akanksha Chhabra; Peter Dang; Artemis Deravanesian; Brenda Hermogeno; James Jen; Eunha Kim; Eric Lee; Gemma Lewis; Jamie Marshall; Kirsten Regalia; Farnaz Shadpour; Aram Shemmassian; Kristin Spivey; Maggie Wells; Joy Wu; Yuki Yamauchi; Amir Yavari; Anna Abrams; Amanda Abramson; Latiffe Amado; Jenny Anderson; Keenan Bashour; Elena Bibikova; Allen Bookatz; Sarah Brewer; Natalie Buu; Stephanie Calvillo; Joseph Cao; Aileen Chang; Daniel Chang; Yuli Chang; Yibing Chen; Joo Choi; Jeyling Chou; Sumit Datta; Ardy Davarifar; Poonam Desai; Jordan Fabrikant; Shahbaz Farnad; Katherine Fu; Eddie Garcia; Nick Garrone; Srpouhi Gasparyan; Phyllis Gayda; Chad Goffstein; Courtney Gonzalez; Mariam Guirguis; Ryan Hassid; Aria Hong; Julie Hong; Lindsay Hovestreydt; Charles Hu; Farid Jamshidian; Katrin Kahen; Linda Kao; Melissa Kelley; Thomas Kho; Sarah Kim; Yein Kim; Brian Kirkpatrick; Emil Kohan; Robert Kwak; Adam Langenbacher; Santino Laxamana; Chris Lee; Janet Lee; So-Youn Lee; To Hang S Lee; Toni Lee; Sheila Lezcano; Henry Lin; Peter Lin; Julie Luu; Thanh Luu; Will Marrs; Erin Marsh; Sarah Min; Tanya Minasian; Amit Misra; Miles Morimoto; Yasaman Moshfegh; Jessica Murray; Cynthia Nguyen; Kha Nguyen; Ernesto Nodado; Amanda O'Donahue; Ndidi Onugha; Nneka Orjiakor; Bhavin Padhiar; Mara Pavel-Dinu; Alex Pavlenko; Edwin Paz; Sarah Phaklides; Lephong Pham; Preethi Poulose; Russell Powell; Aya Pusic; Divi Ramola; Meghann Ribbens; Bassel Rifai; Desiree Rosselli; Manyak Saakyan; Pamela Saarikoski; Miriam Segura; Ramnik Singh; Vivek Singh; Emily Skinner; Daniel Solomin; Kosha Soneji; Erika Stageberg; Marina Stavchanskiy; Leena Tekchandani; Leo Thai; Jayantha Thiyanaratnam; Maurine Tong; Aneet Toor; Steve Tovar; Kelly Trangsrud; Wah-Yung Tsang; Marc Uemura; Mary Unkovic; Emily Vollmer; Emily Weiss; Damien Wood; Sophia Wu; Winston Wu; Qing Xu; Kevin Yackle; Will Yarosh; Laura Yee; George Yen; Grant Alkin; Sheryllene Go; Devon M Huff; Helena Minye; Eric Paul; Nikki Villarasa; Allison Milchanowski; Utpal Banerjee
Journal:  PLoS Biol       Date:  2005-02       Impact factor: 8.029

8.  Analysis of genetic mosaics in developing and adult Drosophila tissues.

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Journal:  Development       Date:  1993-04       Impact factor: 6.868

  8 in total
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