Literature DB >> 17720797

Isolated poly(3-hydroxybutyrate) (PHB) granules are complex bacterial organelles catalyzing formation of PHB from acetyl coenzyme A (CoA) and degradation of PHB to acetyl-CoA.

Keiichi Uchino1, Terumi Saito, Birgit Gebauer, Dieter Jendrossek.   

Abstract

Poly(3-hydroxybutyrate) (PHB) granules isolated in native form (nPHB granules) from Ralstonia eutropha catalyzed formation of PHB from (14)C-labeled acetyl coenzyme A (CoA) in the presence of NADPH and concomitantly released CoA, revealing that PHB biosynthetic proteins (acetoacetyl-CoA thiolase, acetoacetyl-CoA reductase, and PHB synthase) are present and active in isolated nPHB granules in vitro. nPHB granules also catalyzed thiolytic cleavage of PHB in the presence of added CoA, resulting in synthesis of 3-hydroxybutyryl-CoA (3HB-CoA) from PHB. Synthesis of 3HB-CoA was also shown by incubation of artificial (protein-free) PHB with CoA and PhaZa1, confirming that PhaZa1 is a PHB depolymerase catalyzing the thiolysis reaction. Acetyl-CoA was the major product detectable after incubation of nPHB granules in the presence of NAD(+), indicating that downstream mobilizing enzyme activities were also present and active in isolated nPHB granules. We propose that intracellular concentrations of key metabolites (CoA, acetyl-CoA, 3HB-CoA, NAD(+)/NADH) determine whether a cell accumulates or degrades PHB. Since the degradation product of PHB is 3HB-CoA, the cells do not waste energy by synthesis and degradation of PHB. Thus, our results explain the frequent finding of simultaneous synthesis and breakdown of PHB.

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Year:  2007        PMID: 17720797      PMCID: PMC2168675          DOI: 10.1128/JB.00752-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  41 in total

Review 1.  Peculiarities of PHA granules preparation and PHA depolymerase activity determination.

Authors:  Dieter Jendrossek
Journal:  Appl Microbiol Biotechnol       Date:  2007-02-21       Impact factor: 4.813

2.  Biochemical evidence that phaZ gene encodes a specific intracellular medium chain length polyhydroxyalkanoate depolymerase in Pseudomonas putida KT2442: characterization of a paradigmatic enzyme.

Authors:  Laura I de Eugenio; Pedro Garci A; José M Luengo; Jesu S M Sanz; Julio San Roma N; José Luis Garci A; Mari A A Prieto
Journal:  J Biol Chem       Date:  2006-12-14       Impact factor: 5.157

3.  Thiolysis of poly(3-hydroxybutyrate) with polyhydroxyalkanoate synthase from Ralstonia eutropha.

Authors:  Keiichi Uchino; Terumi Saito
Journal:  J Biochem       Date:  2006-03       Impact factor: 3.387

Review 4.  Biochemical and molecular basis of microbial synthesis of polyhydroxyalkanoates in microorganisms.

Authors:  A Steinbüchel; S Hein
Journal:  Adv Biochem Eng Biotechnol       Date:  2001       Impact factor: 2.635

5.  Assay of poly(3-hydroxybutyrate) depolymerase activity and product determination.

Authors:  Birgit Gebauer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

6.  Catalytic triad of intracellular poly(3-hydroxybutyrate) depolymerase (PhaZ1) in Ralstonia eutropha H16.

Authors:  Teruyuki Kobayashi; Terumi Saito
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

7.  Influence of homologous phasins (PhaP) on PHA accumulation and regulation of their expression by the transcriptional repressor PhaR in Ralstonia eutropha H16.

Authors:  Markus Pötter; Helena Müller; Alexander Steinbüchel
Journal:  Microbiology (Reading)       Date:  2005-03       Impact factor: 2.777

8.  Regulation of phasin expression and polyhydroxyalkanoate (PHA) granule formation in Ralstonia eutropha H16.

Authors:  Markus Pötter; Mohamed H Madkour; Frank Mayer; Alexander Steinbüchel
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

9.  Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.

Authors:  Gregory M York; Joachim Lupberger; Jiamin Tian; Adam G Lawrence; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

10.  Considerations on the structure and biochemistry of bacterial polyhydroxyalkanoic acid inclusions.

Authors:  A Steinbuchel; K Aerts; W Babel; C Follner; M Liebergesell; M H Madkour; F Mayer; U Pieper-Furst; A Pries; H E Valentin
Journal:  Can J Microbiol       Date:  1995       Impact factor: 2.419

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  32 in total

1.  Roles of multiple acetoacetyl coenzyme A reductases in polyhydroxybutyrate biosynthesis in Ralstonia eutropha H16.

Authors:  Charles F Budde; Alison E Mahan; Jingnan Lu; Chokyun Rha; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

2.  Poly(3-hydroxybutyrate) (PHB) depolymerase PhaZa1 is involved in mobilization of accumulated PHB in Ralstonia eutropha H16.

Authors:  Keiichi Uchino; Terumi Saito; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2007-12-21       Impact factor: 4.792

Review 3.  Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

Authors:  Dieter Jendrossek
Journal:  J Bacteriol       Date:  2009-03-06       Impact factor: 3.490

4.  Exploiting genomic patterns to discover new supramolecular protein assemblies.

Authors:  Morgan Beeby; Thomas A Bobik; Todd O Yeates
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

5.  Proteomic phenotyping of Novosphingobium nitrogenifigens reveals a robust capacity for simultaneous nitrogen fixation, polyhydroxyalkanoate production, and resistance to reactive oxygen species.

Authors:  Anne-Marie Smit; Timothy J Strabala; Lifeng Peng; Pisana Rawson; Gareth Lloyd-Jones; T William Jordan
Journal:  Appl Environ Microbiol       Date:  2012-05-11       Impact factor: 4.792

6.  Identification and characterization of a novel intracellular poly(3-hydroxybutyrate) depolymerase from Bacillus megaterium.

Authors:  Hui-Ju Chen; Shih-Chuan Pan; Gwo-Chyuan Shaw
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

7.  Comparative proteome analysis reveals four novel polyhydroxybutyrate (PHB) granule-associated proteins in Ralstonia eutropha H16.

Authors:  Anna Sznajder; Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

Review 8.  Genome characteristics dictate poly-R-(3)-hydroxyalkanoate production in Cupriavidus necator H16.

Authors:  Gurusamy Kutralam-Muniasamy; Fermín Peréz-Guevara
Journal:  World J Microbiol Biotechnol       Date:  2018-05-24       Impact factor: 3.312

9.  Synthesis Gas (Syngas)-Derived Medium-Chain-Length Polyhydroxyalkanoate Synthesis in Engineered Rhodospirillum rubrum.

Authors:  Daniel Heinrich; Matthias Raberg; Philipp Fricke; Shane T Kenny; Laura Morales-Gamez; Ramesh P Babu; Kevin E O'Connor; Alexander Steinbüchel
Journal:  Appl Environ Microbiol       Date:  2016-09-30       Impact factor: 4.792

10.  Whole-genome microarray and gene deletion studies reveal regulation of the polyhydroxyalkanoate production cycle by the stringent response in Ralstonia eutropha H16.

Authors:  Christopher J Brigham; Daan R Speth; ChoKyun Rha; Anthony J Sinskey
Journal:  Appl Environ Microbiol       Date:  2012-09-07       Impact factor: 4.792

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