Literature DB >> 18156336

Poly(3-hydroxybutyrate) (PHB) depolymerase PhaZa1 is involved in mobilization of accumulated PHB in Ralstonia eutropha H16.

Keiichi Uchino1, Terumi Saito, Dieter Jendrossek.   

Abstract

The recently finished genome sequence of Ralstonia eutropha H16 harbors nine genes that are thought to encode functions for intracellular depolymerization (mobilization) of storage poly(3-hydroxybutyrate) (PHB). Based on amino acid similarities, the gene products belong to four classes (PhaZa1 to PhaZa5, PhaZb, PhaZc, and PhaZd1/PhaZd2). However, convincing direct evidence for the in vivo roles of the gene products is poor. In this study, we selected four candidate genes (phaZa1, phaZb, phaZc, and phaZd1) representing the four classes and investigated the physiological function of the gene products (i) with recombinant Escherichia coli strains and (ii) with R. eutropha null mutants. Evidence for weak but significant PHB depolymerase activity was obtained only for PhaZa1. The physiological roles of the other potential PHB depolymerases remain uncertain.

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Year:  2007        PMID: 18156336      PMCID: PMC2258578          DOI: 10.1128/AEM.02342-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  39 in total

Review 1.  Peculiarities of PHA granules preparation and PHA depolymerase activity determination.

Authors:  Dieter Jendrossek
Journal:  Appl Microbiol Biotechnol       Date:  2007-02-21       Impact factor: 4.813

2.  Biochemical evidence that phaZ gene encodes a specific intracellular medium chain length polyhydroxyalkanoate depolymerase in Pseudomonas putida KT2442: characterization of a paradigmatic enzyme.

Authors:  Laura I de Eugenio; Pedro Garci A; José M Luengo; Jesu S M Sanz; Julio San Roma N; José Luis Garci A; Mari A A Prieto
Journal:  J Biol Chem       Date:  2006-12-14       Impact factor: 5.157

3.  Assay of poly(3-hydroxybutyrate) depolymerase activity and product determination.

Authors:  Birgit Gebauer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

4.  Chiral compounds from bacterial polyesters: sugars to plastics to fine chemicals.

Authors:  S Y Lee; Y Lee; F Wang
Journal:  Biotechnol Bioeng       Date:  1999-11-05       Impact factor: 4.530

5.  Intracellular depolymerase activity in isolated inclusion bodies containing polyhydroxyalkanoates with long alkyl and functional substituents in the side chain.

Authors:  L J Foster; R W Lenz; R C Fuller
Journal:  Int J Biol Macromol       Date:  1999-11       Impact factor: 6.953

6.  Metabolic engineering of Escherichia coli for production of enantiomerically pure (R)-(--)-hydroxycarboxylic acids.

Authors:  Sang Yup Lee; Young Lee
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

7.  Metabolism of poly(3-hydroxyalkanoates) (PHAs) by Pseudomonas oleovorans. Identification and sequences of genes and function of the encoded proteins in the synthesis and degradation of PHA.

Authors:  G W Huisman; E Wonink; R Meima; B Kazemier; P Terpstra; B Witholt
Journal:  J Biol Chem       Date:  1991-02-05       Impact factor: 5.157

8.  Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.

Authors:  Gregory M York; Joachim Lupberger; Jiamin Tian; Adam G Lawrence; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

9.  DEPOLYMERIZATION OF POLY-BETA-HYDROXYBUTYRATE BY INTRACELLULAR ENZYME SYSTEM.

Authors:  J M MERRICK; M DOUDOROFF
Journal:  J Bacteriol       Date:  1964-07       Impact factor: 3.490

10.  A sensitive, viable-colony staining method using Nile red for direct screening of bacteria that accumulate polyhydroxyalkanoic acids and other lipid storage compounds.

Authors:  P Spiekermann; B H Rehm; R Kalscheuer; D Baumeister; A Steinbüchel
Journal:  Arch Microbiol       Date:  1999-01       Impact factor: 2.552

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  21 in total

Review 1.  The dynamic roles of intracellular lipid droplets: from archaea to mammals.

Authors:  Denis J Murphy
Journal:  Protoplasma       Date:  2011-10-15       Impact factor: 3.356

2.  The Puzzling Conservation and Diversification of Lipid Droplets from Bacteria to Eukaryotes.

Authors:  Josselin Lupette; Eric Maréchal
Journal:  Results Probl Cell Differ       Date:  2020

Review 3.  Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

Authors:  Dieter Jendrossek
Journal:  J Bacteriol       Date:  2009-03-06       Impact factor: 3.490

4.  Identification and characterization of a novel intracellular poly(3-hydroxybutyrate) depolymerase from Bacillus megaterium.

Authors:  Hui-Ju Chen; Shih-Chuan Pan; Gwo-Chyuan Shaw
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

5.  σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111.

Authors:  Martina Lardi; Claudio Aguilar; Alessandro Pedrioli; Ulrich Omasits; Angela Suppiger; Gerardo Cárcamo-Oyarce; Nadine Schmid; Christian H Ahrens; Leo Eberl; Gabriella Pessi
Journal:  Appl Environ Microbiol       Date:  2015-04-03       Impact factor: 4.792

6.  Comparative proteome analysis reveals four novel polyhydroxybutyrate (PHB) granule-associated proteins in Ralstonia eutropha H16.

Authors:  Anna Sznajder; Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

Review 7.  Genome characteristics dictate poly-R-(3)-hydroxyalkanoate production in Cupriavidus necator H16.

Authors:  Gurusamy Kutralam-Muniasamy; Fermín Peréz-Guevara
Journal:  World J Microbiol Biotechnol       Date:  2018-05-24       Impact factor: 3.312

8.  3-Hydroxybutyrate Derived from Poly-3-Hydroxybutyrate Mobilization Alleviates Protein Aggregation in Heat-Stressed Herbaspirillum seropedicae SmR1.

Authors:  Luis Paulo Silveira Alves; Arquimedes Paixão Santana-Filho; Guilherme Lanzi Sassaki; Fabio de Oliveira Pedrosa; Emanuel Maltempi de Souza; Leda Satie Chubatsu; Marcelo Müller-Santos
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

9.  Regulation of Polyhydroxybutyrate Synthesis in the Soil Bacterium Bradyrhizobium diazoefficiens.

Authors:  J I Quelas; S Mesa; E J Mongiardini; D Jendrossek; A R Lodeiro
Journal:  Appl Environ Microbiol       Date:  2016-06-30       Impact factor: 4.792

10.  Complete PHB mobilization in Escherichia coli enhances the stress tolerance: a potential biotechnological application.

Authors:  Qian Wang; Hongmin Yu; Yongzhen Xia; Zhen Kang; Qingsheng Qi
Journal:  Microb Cell Fact       Date:  2009-08-31       Impact factor: 5.328

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